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抑制因子sufJ:一种诱导翻译移码的新型tRNA突变体。

Suppressor sufJ: a novel type of tRNA mutant that induces translational frameshifting.

作者信息

Bossi L, Smith D M

出版信息

Proc Natl Acad Sci U S A. 1984 Oct;81(19):6105-9. doi: 10.1073/pnas.81.19.6105.

DOI:10.1073/pnas.81.19.6105
PMID:6091135
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC391868/
Abstract

We describe the DNA sequence change responsible for the creation of a frameshift-suppressor gene in Salmonella typhimurium. The suppressor, sufJ, results from a base-pair insertion in the gene coding for a threonine transfer RNA (tRNA3Thr). Unlike previously studied frameshift suppressor mutations, the sufJ insertion does not fall within the sequence corresponding to the tRNA anticodon. The insertion (a G.C base pair) occurs within a run of three G.C base pairs in that region of the gene coding for one strand of the anticodon stem. In the secondary structure of the mature tRNA, the net result is that an extra, unpaired cytidine residue is pushed into the anticodon loop, thus increasing the size of the loop to eight nucleotides. These findings are discussed in connection with the peculiar "three-out-of-four" method of reading by the sufJ suppressor. A unifying model is presented accounting for the contrasting decoding behaviors of tRNAs with eight-nucleotide-long anticodon loops.

摘要

我们描述了导致鼠伤寒沙门氏菌中移码抑制基因产生的DNA序列变化。这种抑制基因sufJ是由编码苏氨酸转运RNA(tRNA3Thr)的基因中的一个碱基对插入所导致的。与之前研究的移码抑制突变不同,sufJ插入并不位于对应于tRNA反密码子的序列内。该插入(一个G.C碱基对)发生在编码反密码子茎一条链的基因区域中的三个G.C碱基对的连续序列内。在成熟tRNA的二级结构中,最终结果是一个额外的未配对胞嘧啶残基被挤入反密码子环,从而使环的大小增加到八个核苷酸。结合sufJ抑制基因独特的“四选三”读取方式对这些发现进行了讨论。提出了一个统一模型,解释具有八个核苷酸长反密码子环的tRNA的对比解码行为。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/1436b49abe7d/pnas00620-0204-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/238c31e95d65/pnas00620-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/ad463d965dea/pnas00620-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/ecfa31b05e02/pnas00620-0204-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/b3df0c673eef/pnas00620-0204-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/1436b49abe7d/pnas00620-0204-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/238c31e95d65/pnas00620-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/ad463d965dea/pnas00620-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/ecfa31b05e02/pnas00620-0204-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/b3df0c673eef/pnas00620-0204-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d1b/391868/1436b49abe7d/pnas00620-0204-c.jpg

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1
Dual function transcripts specifying tRNA and mRNA.指定tRNA和mRNA的双功能转录本。
Nature. 1981 Dec 3;294(5840):422-7. doi: 10.1038/294422a0.
2
Nucleotide sequence of the SUF2 frameshift suppressor gene of Saccharomyces cerevisiae.酿酒酵母SUF2移码抑制基因的核苷酸序列。
Proc Natl Acad Sci U S A. 1982 Jun;79(11):3565-9. doi: 10.1073/pnas.79.11.3565.
3
Nucleotide insertion in the anticodon loop of a glycine transfer RNA causes missense suppression.甘氨酸转运RNA反密码子环中的核苷酸插入导致错义抑制。
Chem Rev. 2024 Jun 26;124(12):7976-8008. doi: 10.1021/acs.chemrev.4c00142. Epub 2024 May 27.
4
Genome Expansion by tRNA +1 Frameshifting at Quadruplet Codons.基因组通过 tRNA +1 框架移位在四联体密码子处扩展。
J Mol Biol. 2022 Apr 30;434(8):167440. doi: 10.1016/j.jmb.2021.167440. Epub 2022 Jan 4.
5
Genetic Code Expansion Through Quadruplet Codon Decoding.通过四联体密码子解码实现遗传密码扩展。
J Mol Biol. 2022 Apr 30;434(8):167346. doi: 10.1016/j.jmb.2021.167346. Epub 2021 Nov 8.
6
Multiplex suppression of four quadruplet codons via tRNA directed evolution.通过 tRNA 定向进化实现四联体密码子的多重抑制。
Nat Commun. 2021 Sep 29;12(1):5706. doi: 10.1038/s41467-021-25948-y.
7
Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.EF-G 催化转位过程中+1 核糖体移码的结构基础。
Nat Commun. 2021 Jul 30;12(1):4644. doi: 10.1038/s41467-021-24911-1.
8
Reprogramming the genetic code.重编程基因密码。
Nat Rev Genet. 2021 Mar;22(3):169-184. doi: 10.1038/s41576-020-00307-7. Epub 2020 Dec 14.
9
Mechanism of tRNA-mediated +1 ribosomal frameshifting.tRNA 介导的+1 核糖体移码机制。
Proc Natl Acad Sci U S A. 2018 Oct 30;115(44):11226-11231. doi: 10.1073/pnas.1809319115. Epub 2018 Sep 27.
10
Systematic Evolution and Study of UAGN Decoding tRNAs in a Genomically Recoded Bacteria.基因组重编码细菌中UAGN解码tRNA的系统进化与研究
Sci Rep. 2016 Feb 24;6:21898. doi: 10.1038/srep21898.
Proc Natl Acad Sci U S A. 1981 Dec;78(12):7408-11. doi: 10.1073/pnas.78.12.7408.
4
The nucleotide sequence of tufB and four nearby tRNA structural genes of Escherichia coli.大肠杆菌tufB及四个相邻tRNA结构基因的核苷酸序列。
Gene. 1980 Dec;12(1-2):33-9. doi: 10.1016/0378-1119(80)90013-x.
5
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6
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7
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8
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