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噬菌体Mu mom基因启动子的S1核酸酶图谱分析:mom表达调控模型

S1 nuclease mapping of the phage Mu mom gene promoter: a model for the regulation of mom expression.

作者信息

Hattman S, Ives J

出版信息

Gene. 1984 Jul-Aug;29(1-2):185-98. doi: 10.1016/0378-1119(84)90179-3.

DOI:10.1016/0378-1119(84)90179-3
PMID:6092220
Abstract

The mom gene of bacteriophage Mu encodes a DNA modification function. Expression of this modification requires the host Escherichia coli Dam (DNA-adenine methylase) function and the transacting phage Mu Dad function. The mom gene was subcloned into a variety of sites on plasmid pBR322. Insertions were made into the HincII and PvuI sites within the amp gene and into the ClaI site of the tet gene promoter. The only clones found were those in which the orientation of the mom gene prevents its transcription from the vector promoter(s), suggesting that constitutive expression of mom from a foreign promoter can occur independently of Dad function but is lethal for the cell. Employing S1 nuclease mapping, we have identified two Mu mRNA transcripts: (1) the gin transcript extends into the gin-mon intercistronic divide and terminates downstream from the BclI site; and (2) the mom transcript appears to initiate about 74 bp upstream from the BclI site, 12 bp downstream from a promoter-like sequence. Production of the mom transcript is dependent on the host Dam activity and on Dad transactivation. In contrast, the gin transcript is produced independently of Dam and Dad functions; the gin transcript may extend into the mom gene, but it appears to be either degraded at the 3' end or differentially terminated. We propose that regulation of mom gene transcription involves both positive and negative regulatory proteins, and that binding of the Dad protein (a "late" Mu protein) is required for transcription initiation by the host RNA polymerase. However, Dad protein action may be inhibited by prior binding of a repressor to the mom operator, located farther upstream. We propose that this repressor (encoded by a phage or host gene) binds to the operator only when there is no active Dam enzyme present, i.e., when there is no methylation of (or methylase binding to) the G-A-T-C sites within the mom operator.

摘要

噬菌体Mu的mom基因编码一种DNA修饰功能。这种修饰的表达需要宿主大肠杆菌Dam(DNA腺嘌呤甲基化酶)功能和反式作用的噬菌体Mu Dad功能。mom基因被亚克隆到质粒pBR322的多个位点。插入到amp基因内的HincII和PvuI位点以及tet基因启动子的ClaI位点。唯一发现的克隆是那些mom基因的方向阻止其从载体启动子转录的克隆,这表明从外源启动子组成型表达mom可以独立于Dad功能发生,但对细胞是致死的。利用S1核酸酶图谱,我们鉴定出两种Mu mRNA转录本:(1)gin转录本延伸到gin - mon顺反子间区域并在BclI位点下游终止;(2)mom转录本似乎在BclI位点上游约74 bp处起始,在一个类似启动子序列下游12 bp处。mom转录本 的产生依赖于宿主Dam活性和Dad反式激活。相反,gin转录本的产生独立于Dam和Dad功能;gin转录本可能延伸到mom基因中,但它似乎在3'端被降解或差异终止。我们提出mom基因转录的调控涉及正调控和负调控蛋白,并且宿主RNA聚合酶转录起始需要Dad蛋白(一种“晚期”Mu蛋白)的结合。然而,Dad蛋白的作用可能被阻遏物先前与位于更上游的mom操纵子的结合所抑制。我们提出这种阻遏物(由噬菌体或宿主基因编码)仅在没有活性Dam酶存在时,即当mom操纵子内的G - A - T - C位点没有甲基化(或甲基化酶结合)时,才与操纵子结合。

相似文献

1
S1 nuclease mapping of the phage Mu mom gene promoter: a model for the regulation of mom expression.噬菌体Mu mom基因启动子的S1核酸酶图谱分析:mom表达调控模型
Gene. 1984 Jul-Aug;29(1-2):185-98. doi: 10.1016/0378-1119(84)90179-3.
2
DNA methyltransferase-dependent transcription of the phage Mu mom gene.噬菌体Mu mom基因的DNA甲基转移酶依赖性转录
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Methylation dependent expression of the mom gene of bacteriophage Mu: deletions downstream from the methylation sites affect expression.噬菌体Mu的mom基因的甲基化依赖性表达:甲基化位点下游的缺失影响表达。
Nucleic Acids Res. 1984 Apr 25;12(8):3535-50. doi: 10.1093/nar/12.8.3535.
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Transcription initiation of Mu mom depends on methylation of the promoter region and a phage-coded transactivator.Mu噬菌体妈妈基因的转录起始依赖于启动子区域的甲基化作用以及一种噬菌体编码的反式激活因子。
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The sequence and mom-transactivation function of the C gene of bacteriophage Mu.噬菌体Mu C基因的序列及非转激活功能
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Analysis of the methylation-regulated Mu mom transcript.甲基化调控的Mu mom转录本分析。
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Escherichia coli OxyR protein represses the unmethylated bacteriophage Mu mom operon without blocking binding of the transcriptional activator C.大肠杆菌OxyR蛋白抑制未甲基化的噬菌体Mu mom操纵子,而不阻止转录激活因子C的结合。
Nucleic Acids Res. 1996 Oct 15;24(20):4042-9. doi: 10.1093/nar/24.20.4042.
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The Escherichia coli regulatory protein OxyR discriminates between methylated and unmethylated states of the phage Mu mom promoter.大肠杆菌调节蛋白OxyR能够区分噬菌体Mu mom启动子的甲基化和未甲基化状态。
EMBO J. 1989 Aug;8(8):2403-10. doi: 10.1002/j.1460-2075.1989.tb08370.x.

引用本文的文献

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Nucleic Acids Res. 2020 Jun 4;48(10):5294-5305. doi: 10.1093/nar/gkaa319.
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Silencing of toxic gene expression by Fis.Fis 沉默毒性基因的表达。
Nucleic Acids Res. 2012 May;40(10):4358-67. doi: 10.1093/nar/gks037. Epub 2012 Jan 28.
3
Escherichia coli OxyR modulation of bacteriophage Mu mom expression in dam+ cells can be attributed to its ability to bind hemimethylated Pmom promoter DNA.
大肠杆菌OxyR对dam+细胞中噬菌体Mu mom表达的调控可归因于其结合半甲基化Pmom启动子DNA的能力。
Nucleic Acids Res. 1997 Nov 1;25(21):4385-8. doi: 10.1093/nar/25.21.4385.
4
Escherichia coli OxyR protein represses the unmethylated bacteriophage Mu mom operon without blocking binding of the transcriptional activator C.大肠杆菌OxyR蛋白抑制未甲基化的噬菌体Mu mom操纵子,而不阻止转录激活因子C的结合。
Nucleic Acids Res. 1996 Oct 15;24(20):4042-9. doi: 10.1093/nar/24.20.4042.
5
In vitro transcriptional activation of the phage Mu mom promoter by C protein.C蛋白对噬菌体Mu mom启动子的体外转录激活作用。
J Bacteriol. 1994 May;176(10):2885-91. doi: 10.1128/jb.176.10.2885-2891.1994.
6
The mom gene of bacteriophage Mu: the mechanism of methylation-dependent expression.噬菌体Mu的mom基因:甲基化依赖性表达的机制。
EMBO J. 1986 Oct;5(10):2719-28. doi: 10.1002/j.1460-2075.1986.tb04556.x.
7
Evidence that adenine methylation influences DNA-protein interactions in Escherichia coli.腺嘌呤甲基化影响大肠杆菌中DNA-蛋白质相互作用的证据。
J Bacteriol. 1985 Oct;164(1):490-3. doi: 10.1128/jb.164.1.490-493.1985.
8
The Escherichia coli regulatory protein OxyR discriminates between methylated and unmethylated states of the phage Mu mom promoter.大肠杆菌调节蛋白OxyR能够区分噬菌体Mu mom启动子的甲基化和未甲基化状态。
EMBO J. 1989 Aug;8(8):2403-10. doi: 10.1002/j.1460-2075.1989.tb08370.x.
9
Role of bacteriophage Mu C protein in activation of the mom gene promoter.噬菌体Mu C蛋白在mom基因启动子激活中的作用。
J Bacteriol. 1989 Apr;171(4):2019-27. doi: 10.1128/jb.171.4.2019-2027.1989.
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Bacteriophage Mu late promoters: four late transcripts initiate near a conserved sequence.噬菌体Mu晚期启动子:四个晚期转录本在一个保守序列附近起始。
J Bacteriol. 1989 Apr;171(4):2003-18. doi: 10.1128/jb.171.4.2003-2018.1989.