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嗜热四膜虫核糖体RNA前体的体外剪接:鸟苷酸在间隔序列切除中的作用。

In vitro splicing of the ribosomal RNA precursor of Tetrahymena: involvement of a guanosine nucleotide in the excision of the intervening sequence.

作者信息

Cech T R, Zaug A J, Grabowski P J

机构信息

Department of Chemistry, University of Colorado, Boulder 80309.

出版信息

Cell. 1981 Dec;27(3 Pt 2):487-96. doi: 10.1016/0092-8674(81)90390-1.

DOI:10.1016/0092-8674(81)90390-1
PMID:6101203
Abstract

In previous studies of transcription and splicing of the ribosomal RNA precursor in isolated Tetrahymena nuclei, we found that the intervening sequence (IVS) was excised as a unique linear RNA molecule and was subsequently cyclized. In the present work, transcription at low monovalent cation concentration is found to inhibit splicing and to lead to the accumulation of a splicing intermediate. This intermediate contains splicing activity that either is tightly bound to the RNA or is part of the RNA molecule itself. The intermediate is able to complete the excision of the IVS when it is incubated with a monovalent cation (75 mM (NH4)2SO4), a divalent cation (5-10 mM MgCl2) and a guanosine compound (1 microM GTP, GDP, GMP or guanosine). ATP, UTP, CTP and guanosine compounds without 2' and 3' hydroxyl groups are inactive in causing excision of the IVS. Accurate excision of the IVS, cyclization of the IVS and (apparently) ligation of the 26S rRNA sequences bordering the IVS all take place under these conditions, suggesting that a single activity is responsible for all three reactions. During excision of the IVS, the 3' hydroxyl of the guanosine moiety becomes linked to the 5' end of the IVS RNA via a normal phosphodiester bond. When GTP is used to drive the reaction, it is added intact without hydrolysis. Based on these results, we propose that Tetrahymena pre-rRNA splicing occurs by a phosphoester transferase mechanism. According to this model, the guanosine cofactor provides the free 3' hydroxyl necessary to initiate a series of three transfers that results in splicing of the pre-rRNA and cyclization of the excised IVS.

摘要

在之前对分离的四膜虫细胞核中核糖体RNA前体的转录和剪接研究中,我们发现间隔序列(IVS)作为一个独特的线性RNA分子被切除,随后环化。在本研究中,发现在低单价阳离子浓度下转录会抑制剪接并导致剪接中间体的积累。该中间体含有紧密结合于RNA或本身就是RNA分子一部分的剪接活性。当该中间体与单价阳离子(75 mM硫酸铵)、二价阳离子(5 - 10 mM氯化镁)和鸟苷化合物(1 μM GTP、GDP、GMP或鸟苷)一起孵育时,能够完成IVS的切除。没有2'和3'羟基的ATP、UTP、CTP和鸟苷化合物在促使IVS切除方面无活性。在这些条件下,IVS的精确切除、IVS的环化以及与IVS相邻的26S rRNA序列的(明显)连接均会发生,这表明单一活性负责所有这三个反应。在IVS切除过程中,鸟苷部分的3'羟基通过正常的磷酸二酯键与IVS RNA的5'端相连。当使用GTP驱动反应时,它完整添加而不水解。基于这些结果,我们提出四膜虫前体rRNA剪接通过磷酸酯转移酶机制发生。根据该模型,鸟苷辅因子提供启动一系列三次转移所需的游离3'羟基,这导致前体rRNA的剪接和切除的IVS的环化。

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1
In vitro splicing of the ribosomal RNA precursor of Tetrahymena: involvement of a guanosine nucleotide in the excision of the intervening sequence.嗜热四膜虫核糖体RNA前体的体外剪接:鸟苷酸在间隔序列切除中的作用。
Cell. 1981 Dec;27(3 Pt 2):487-96. doi: 10.1016/0092-8674(81)90390-1.
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New reactions of the ribosomal RNA precursor of Tetrahymena and the mechanism of self-splicing.嗜热四膜虫核糖体RNA前体的新反应及自我剪接机制
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Self-splicing RNA: autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena.自我剪接RNA:嗜热四膜虫核糖体RNA间隔序列的自动切除与自动环化
Cell. 1982 Nov;31(1):147-57. doi: 10.1016/0092-8674(82)90414-7.
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Autocatalytic cyclization of an excised intervening sequence RNA is a cleavage-ligation reaction.切除的居间序列RNA的自催化环化是一种切割-连接反应。
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Characterization of an authentic intermediate in the self-splicing process of ribosomal precursor RNA in macronuclei of Tetrahymena thermophila.嗜热栖热四膜虫大核核糖体前体RNA自我剪接过程中真实中间体的表征
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Reversibility of cyclization of the Tetrahymena rRNA intervening sequence: implication for the mechanism of splice site choice.嗜热四膜虫核糖体RNA间隔序列环化的可逆性:对剪接位点选择机制的启示
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The intervening sequence excised from the ribosomal RNA precursor of Tetrahymena contains a 5-terminal guanosine residue not encoded by the DNA.从四膜虫核糖体RNA前体切除的居间序列含有一个DNA未编码的5'-末端鸟苷残基。
Nucleic Acids Res. 1982 May 11;10(9):2823-38. doi: 10.1093/nar/10.9.2823.
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Ribozyme inhibitors: deoxyguanosine and dideoxyguanosine are competitive inhibitors of self-splicing of the Tetrahymena ribosomal ribonucleic acid precursor.核酶抑制剂:脱氧鸟苷和双脱氧鸟苷是嗜热四膜虫核糖体核糖核酸前体自我剪接的竞争性抑制剂。
Biochemistry. 1986 Aug 12;25(16):4473-7. doi: 10.1021/bi00364a001.
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Fate of an intervening sequence ribonucleic acid: excision and cyclization of the Tetrahymena ribosomal ribonucleic acid intervening sequence in vivo.居间序列核糖核酸的命运:嗜热四膜虫核糖体核糖核酸居间序列在体内的切除与环化
Biochemistry. 1983 May 10;22(10):2390-7. doi: 10.1021/bi00279a014.
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Reactions of the intervening sequence of the Tetrahymena ribosomal ribonucleic acid precursor: pH dependence of cyclization and site-specific hydrolysis.嗜热四膜虫核糖体核糖核酸前体中间序列的反应:环化和位点特异性水解的pH依赖性
Biochemistry. 1985 Oct 22;24(22):6211-8. doi: 10.1021/bi00343a027.

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