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Synthesis of 5' fragments of formylmethionine transfer ribonucleic acid and their reconstitution with a natural three-quarter molecule.

作者信息

Ohtsuka E, Nishikawa S, Fukumoto R, Uemura H, Tanaka T, Nakagawa E, Miyake T, Ikehara M

出版信息

Eur J Biochem. 1980 Apr;105(3):481-7. doi: 10.1111/j.1432-1033.1980.tb04523.x.

DOI:10.1111/j.1432-1033.1980.tb04523.x
PMID:6154576
Abstract

An eicosanucleotide C--G--C--G--G--G--G--U--G--G--A--G--C--A--G--C--C--U--G--Gp corresponding to the bases 1--20 of the nascent sequence for the Escherichia coli tRNAfMet has been synthesized by the joining of the chemically synthesized oligonucleotides C--G--C--G, G--G--G--U--G--G and A--G--C--A--G--C--C--U--G--Gp using RNA ligase from T4-infected E. coli. The hexanucleotide and decanucleotide were phosphorylated with polynucleotide kinase and [gamma-32P]ATP prior to the joining reactions. The decanucleotide and eicosanucleotide were reconstituted respectively with the 3'-three-quarter molecule obtained by limited digestion with RNase T1 of the natural tRNAfMet from E. coli and the activity of the complex as a methionine acceptor was tested using purified methionyl-tRNA synthetase from E. coli. The amino acid acceptor activity of the reconstituted molecules was 11% and 84% with respect to that of the intact tRNAfMet.

摘要

相似文献

1
Synthesis of 5' fragments of formylmethionine transfer ribonucleic acid and their reconstitution with a natural three-quarter molecule.
Eur J Biochem. 1980 Apr;105(3):481-7. doi: 10.1111/j.1432-1033.1980.tb04523.x.
2
Joining of 3'-modified oligonucleotides by T4 RNA ligase. Synthesis of a heptadecanucleotide corresponding to the bases 61--77 from Escherichia coli tRNAfMet.通过T4 RNA连接酶连接3'-修饰的寡核苷酸。合成对应于大肠杆菌甲硫氨酸起始tRNA中第61-77位碱基的十七聚核苷酸。
Biochemistry. 1978 Nov 14;17(23):4894-9. doi: 10.1021/bi00616a006.
3
Total synthesis of a RNA molecule with sequence identical to that of Escherichia coli formylmethionine tRNA.全合成一个序列与大肠杆菌甲酰甲硫氨酸转运核糖核酸相同的核糖核酸分子。
Proc Natl Acad Sci U S A. 1981 Sep;78(9):5493-7. doi: 10.1073/pnas.78.9.5493.
4
Synthesis of the nascent strand of tRNAfMet from E coli.
Nucleic Acids Symp Ser. 1979(6):s195-8.
5
Studies on transfer ribonucleic acids and related compounds. XXXII. Synthesis of ribonucleotides corresponding to residues 1-5 and 6-10 of tRNAfMet from E. coli and their base conversion analogs.转运核糖核酸及相关化合物的研究。XXXII. 大肠杆菌中甲硫氨酸起始转运核糖核酸(tRNAfMet)第1 - 5位和6 - 10位残基对应的核糖核苷酸及其碱基转换类似物的合成。
Nucleic Acids Res. 1979 Nov 10;7(5):1283-96. doi: 10.1093/nar/7.5.1283.
6
Comparison of substrate base sequences for RNA ligase reactions in the synthesis of a tetradecanucleotide corresponding to bases 21-34 of E. coli tRNAfMet 1.用于合成对应于大肠杆菌甲硫氨酸起始tRNA第21 - 34位碱基的十四聚核苷酸的RNA连接酶反应的底物碱基序列比较1。
Nucleic Acids Res. 1980 Sep 11;8(17):3909-16. doi: 10.1093/nar/8.17.3909.
7
Total synthesis of tRNAfMet.甲硫氨酸起始转运核糖核酸的全合成
Nucleic Acids Symp Ser. 1980(7):335-43.
8
Base substitutions in the wobble position of the anticodon inhibit aminoacylation of E. coli tRNAfMet by E. coli Met-tRNA synthetase.反密码子摆动位置的碱基替换会抑制大肠杆菌甲硫氨酰 - tRNA合成酶对大肠杆菌起始tRNAfMet的氨酰化作用。
Nucleic Acids Res. 1983 Mar 11;11(5):1439-55. doi: 10.1093/nar/11.5.1439.
9
Studies on transfer ribonucleic acids and related compounds. XL. Synthesis of an eicosaribonucleotide corresponding to residues 35-54 of tRNAfMet from E. coli.转移核糖核酸及相关化合物的研究。XL。对应于大肠杆菌甲硫氨酸起始转运核糖核酸(tRNAfMet)35 - 54位残基的二十碳核糖核苷酸的合成。
Nucleic Acids Res. 1981 Jul 24;9(14):3503-22. doi: 10.1093/nar/9.14.3503.
10
Studies on transfer ribonucleic acids and related compounds. XXV. Synthesis of E. coli tRNA(met)(f) 5'-terminal tetranucleotide C-G-C-Gp and its sequence analog U-G-C-Gp.转移核糖核酸及相关化合物的研究。二十五。大肠杆菌甲硫氨酸起始转运核糖核酸(tRNA<sup>(met)</sup><sub>(f)</sub>)5'-末端四核苷酸C-G-C-Gp及其序列类似物U-G-C-Gp的合成。
Chem Pharm Bull (Tokyo). 1979 Feb;27(2):341-5. doi: 10.1248/cpb.27.341.

引用本文的文献

1
Total synthesis of a RNA molecule with sequence identical to that of Escherichia coli formylmethionine tRNA.全合成一个序列与大肠杆菌甲酰甲硫氨酸转运核糖核酸相同的核糖核酸分子。
Proc Natl Acad Sci U S A. 1981 Sep;78(9):5493-7. doi: 10.1073/pnas.78.9.5493.
2
Studies on transfer ribonucleic acids and related compounds. XL. Synthesis of an eicosaribonucleotide corresponding to residues 35-54 of tRNAfMet from E. coli.转移核糖核酸及相关化合物的研究。XL。对应于大肠杆菌甲硫氨酸起始转运核糖核酸(tRNAfMet)35 - 54位残基的二十碳核糖核苷酸的合成。
Nucleic Acids Res. 1981 Jul 24;9(14):3503-22. doi: 10.1093/nar/9.14.3503.
3
Comparison of substrate base sequences for RNA ligase reactions in the synthesis of a tetradecanucleotide corresponding to bases 21-34 of E. coli tRNAfMet 1.
用于合成对应于大肠杆菌甲硫氨酸起始tRNA第21 - 34位碱基的十四聚核苷酸的RNA连接酶反应的底物碱基序列比较1。
Nucleic Acids Res. 1980 Sep 11;8(17):3909-16. doi: 10.1093/nar/8.17.3909.
4
Modification of the anticodon triplet of E.coli tRNAMetf by replacement with trimers complementary to non-sense codons UAG and UAA.通过用与无义密码子UAG和UAA互补的三聚体替换大肠杆菌甲硫氨酸起始转运RNA(tRNAMetf)的反密码子三联体进行修饰。
Nucleic Acids Res. 1983 Jun 25;11(12):3863-72. doi: 10.1093/nar/11.12.3863.
5
E. coli initiator tRNA analogs with different nucleotides in the discriminator base position.在鉴别碱基位置具有不同核苷酸的大肠杆菌起始tRNA类似物。
Nucleic Acids Res. 1982 Oct 25;10(20):6531-9. doi: 10.1093/nar/10.20.6531.
6
Replacement and insertion of nucleotides at the anticodon loop of E. coli tRNAMetf by ligation of chemically synthesized ribooligonucleotides.通过化学合成的核糖寡核苷酸连接来替换和插入大肠杆菌甲硫氨酸起始转运核糖核酸(tRNAMetf)反密码子环处的核苷酸。
Nucleic Acids Res. 1985 May 24;13(10):3685-97. doi: 10.1093/nar/13.10.3685.