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体外的基因开关:噬菌体Mu的Gin蛋白介导的DNA倒位

A genetic switch in vitro: DNA inversion by Gin protein of phage Mu.

作者信息

Plasterk R H, Kanaar R, van de Putte P

出版信息

Proc Natl Acad Sci U S A. 1984 May;81(9):2689-92. doi: 10.1073/pnas.81.9.2689.

DOI:10.1073/pnas.81.9.2689
PMID:6232613
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC345135/
Abstract

Inversion of the G segment in the DNA of Escherichia coli phage Mu depends on the Mu Gin protein and alters the host range of the phage. The frequency of the inversion reaction is low both in the lysogenic state and during lytic growth. A sensitive assay was developed to detect low levels of G inversion: the E. coli lac operon was inserted within the invertible G segment in such a way that the lac operon was expressed only by G(-) clones. As a result Gin-catalyzed inversion from G(+) to G(-) can be monitored as a lactose-negative to lactose-utilizing switch. Using a crude extract from a Gin-overproducing strain and this assay plasmid, we could detect a low level of G inversion in vitro (1% in 30 min). The reaction depends on Mg2+ and a supercoiled substrate. Under optimized reaction conditions over 15% of the plasmids had the G segment inverted after incubation with Gin in vitro. The inversion was then visualized by agarose gel analysis of plasmid DNA digested by restriction endonucleases. The Gin protein retains its catalytic properties upon partial purification. The mechanism of this genetic switch can now be studied in vitro.

摘要

大肠杆菌噬菌体Mu DNA中G片段的倒位依赖于Mu Gin蛋白,并改变噬菌体的宿主范围。在溶原状态和裂解生长期间,倒位反应的频率都很低。我们开发了一种灵敏的检测方法来检测低水平的G倒位:将大肠杆菌乳糖操纵子插入可倒位的G片段中,使得乳糖操纵子仅由G(-)克隆表达。结果,Gin催化的从G(+)到G(-)的倒位可以作为乳糖阴性到利用乳糖的转变来监测。使用来自Gin高产菌株的粗提物和该检测质粒,我们可以在体外检测到低水平的G倒位(30分钟内为1%)。该反应依赖于Mg2+和超螺旋底物。在优化的反应条件下,超过15%的质粒在体外与Gin孵育后G片段发生了倒位。然后通过对限制性内切酶消化的质粒DNA进行琼脂糖凝胶分析来观察倒位情况。Gin蛋白在部分纯化后仍保留其催化特性。现在可以在体外研究这种遗传开关的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f38/345135/b391faa1663e/pnas00610-0098-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f38/345135/c8a0e5db9f55/pnas00610-0097-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f38/345135/b391faa1663e/pnas00610-0098-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f38/345135/c8a0e5db9f55/pnas00610-0097-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f38/345135/b391faa1663e/pnas00610-0098-a.jpg

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1
A genetic switch in vitro: DNA inversion by Gin protein of phage Mu.体外的基因开关:噬菌体Mu的Gin蛋白介导的DNA倒位
Proc Natl Acad Sci U S A. 1984 May;81(9):2689-92. doi: 10.1073/pnas.81.9.2689.
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Site-specific recombination in bacteriophage Mu: characterization of binding sites for the DNA invertase Gin.
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A site-specific, conservative recombination system carried by bacteriophage P1. Mapping the recombinase gene cin and the cross-over sites cix for the inversion of the C segment.由噬菌体P1携带的位点特异性保守重组系统。绘制重组酶基因cin和C片段倒位的交叉位点cix图谱。
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Site-specific recombination by Gin of bacteriophage Mu: inversions and deletions.噬菌体Mu的Gin介导的位点特异性重组:倒位和缺失
Virology. 1983 May;127(1):24-36. doi: 10.1016/0042-6822(83)90367-7.
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