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兔免疫球蛋白κ2 J-C基因座的结构分析揭示了多个缺失。

Structural analysis of a rabbit immunoglobulin kappa 2 J-C locus reveals multiple deletions.

作者信息

Emorine L, Max E E

出版信息

Nucleic Acids Res. 1983 Dec 20;11(24):8877-90. doi: 10.1093/nar/11.24.8877.

DOI:10.1093/nar/11.24.8877
PMID:6324107
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326631/
Abstract

We previously reported that domestic rabbits harbor at least two DNA sequences that hybridize strongly to immunoglobulin kappa C region probes in Southern blots. One of these was cloned from a domestic b4 rabbit and identified as the gene for the nominal b4 allotype kappa chain which is expressed at high levels. We now have cloned (from a b4 rabbit) the other homologous sequence and find that it encodes a kappa chain nearly identical to the kappa 2 chain of "bas" rabbits, which is not normally expressed at detectable levels in domestic rabbits. Sequence analysis of this kappa 2 chain reveals a J kappa -C kappa locus with no obvious coding sequence defects that could explain its low expression. However, several base changes in a putative enhancer region as well as deletions (totalling about 1.5 kb) in the J-C intron might be related to low expression. The comparison between these two kappa genes raises questions about the selective pressures operating during the evolution of this gene system.

摘要

我们先前报道,家兔在Southern印迹中含有至少两个与免疫球蛋白κC区探针强烈杂交的DNA序列。其中一个是从一只家兔b4中克隆出来的,被鉴定为命名为b4同种异型κ链的基因,该基因高水平表达。我们现在(从一只b4兔中)克隆了另一个同源序列,发现它编码的κ链与“bas”兔的κ2链几乎相同,在家兔中该链通常不以可检测水平表达。对该κ2链的序列分析揭示了一个Jκ-Cκ基因座,没有明显的编码序列缺陷可以解释其低表达。然而,一个假定增强子区域的几个碱基变化以及J-C内含子中的缺失(总计约1.5 kb)可能与低表达有关。这两个κ基因之间的比较引发了关于该基因系统进化过程中作用的选择压力的问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae68/326631/80ea1e3d34f8/nar00369-0350-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae68/326631/80ea1e3d34f8/nar00369-0350-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae68/326631/80ea1e3d34f8/nar00369-0350-a.jpg

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本文引用的文献

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Accepted mutations in a gene family: evolutionary diversification of duplicated DNA.一个基因家族中被认可的突变:重复DNA的进化多样化
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The structure and evolution of the human beta-globin gene family.人类β-珠蛋白基因家族的结构与进化
猪(Sus scrofa domestica)免疫球蛋白 κ 基因座通过种系基因转换的进化。
Immunogenetics. 2012 Apr;64(4):303-11. doi: 10.1007/s00251-011-0589-6. Epub 2011 Nov 23.
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Immunoglobulin light chain class multiplicity and alternative organizational forms in early vertebrate phylogeny.早期脊椎动物系统发育中免疫球蛋白轻链类别的多样性和替代组织形式。
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Genetics and expression of kappa-type light chains in Basilea rabbits.巴西利亚兔κ型轻链的遗传学与表达
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Kappa-chain allotypes and isotypes in the rabbit: cDNA sequences of clones encoding b9 suggest an evolutionary pathway and possible role of the interdomain disulfide bond in quantitative allotype expression.兔的κ链同种异型和同种型:编码b9的克隆的cDNA序列揭示了一种进化途径以及结构域间二硫键在定量同种异型表达中的可能作用。
Proc Natl Acad Sci U S A. 1984 Mar;81(6):1794-8. doi: 10.1073/pnas.81.6.1794.
7
A genomic gene encoding the b5 rabbit immunoglobulin kappa constant region: implications for latent allotype phenomenon.一种编码兔免疫球蛋白κ轻链恒定区b5的基因组基因:对潜在同种异型现象的影响。
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