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小鼠免疫球蛋白重链Cμ基因及其原始构建模块内49个碱基的十聚体、九聚体和八聚体的重复情况。

Recurrence of 49-base decamers, nonomers, and octamers within mouse C mu gene of Ig heavy chain and its primordial building block.

作者信息

Yazaki A, Ohno S

出版信息

Proc Natl Acad Sci U S A. 1983 Apr;80(8):2337-40. doi: 10.1073/pnas.80.8.2337.

DOI:10.1073/pnas.80.8.2337
PMID:6403948
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC393815/
Abstract

Within the published 2,168-base-long mouse C mu gene of Ig heavy chain consisting of four coding and four noncoding segments, 2 base decamers, 8 nonomers, and 39 octamers recurred. Recurring base heptamers (about 100) and hexamers (about 350) were simply too numerous to merit individual identification. In spite of extensive overlaps between these recurring base decamers to hexamers, they occupied nearly the entire length of mouse Ig C mu gene. As with other genes of the beta-sheet-forming beta 2-microglobulin family, the Ig C mu gene (flanking and intervening noncoding sequences included) is not a unique sequence but rather it is degenerate repeats of the 45-base-long primordial building-block sequence uniquely its own. This primordial building block must originally have specified the 15-amino-acid-residue-long primordial arm of beta-sheet-forming loops, the characteristics of the beta 2-microglobulin family of polypeptides.

摘要

在已发表的由四个编码和四个非编码区段组成的2168个碱基长的小鼠免疫球蛋白重链Cμ基因中,出现了2个碱基十聚体、8个碱基九聚体和39个碱基八聚体。反复出现的碱基七聚体(约100个)和六聚体(约350个)数量太多,无法逐一识别。尽管这些反复出现的碱基十聚体到六聚体之间有广泛重叠,但它们几乎占据了小鼠免疫球蛋白Cμ基因的全长。与形成β折叠的β2微球蛋白家族的其他基因一样,免疫球蛋白Cμ基因(包括侧翼和间隔的非编码序列)不是一个独特的序列,而是由其特有的45个碱基长的原始构建块序列的简并重复组成。这个原始构建块最初一定指定了形成β折叠环的15个氨基酸残基长的原始臂,这是β2微球蛋白家族多肽的特征。

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Recurrence of 49-base decamers, nonomers, and octamers within mouse C mu gene of Ig heavy chain and its primordial building block.小鼠免疫球蛋白重链Cμ基因及其原始构建模块内49个碱基的十聚体、九聚体和八聚体的重复情况。
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引用本文的文献

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The primitive code and repeats of base oligomers as the primordial protein-encoding sequence.作为原始蛋白质编码序列的原始密码和碱基寡聚物重复序列。
Proc Natl Acad Sci U S A. 1983 Jun;80(11):3391-5. doi: 10.1073/pnas.80.11.3391.
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Repeats of base oligomers as the primordial coding sequences of the primeval earth and their vestiges in modern genes.作为原始地球原始编码序列的碱基寡聚物重复序列及其在现代基因中的遗迹。
J Mol Evol. 1984;20(3-4):313-21. doi: 10.1007/BF02104737.

本文引用的文献

1
Events in the evolution of pre-proinsulin.胰岛素原前体进化过程中的事件。
Science. 1982 Aug 20;217(4561):729-32. doi: 10.1126/science.7100918.
2
Identification of the 45-base-long primordial building block of the entire class I major histocompatibility complex antigen gene.鉴定整个I类主要组织相容性复合体抗原基因的45个碱基长的原始构建模块。
Proc Natl Acad Sci U S A. 1982 Oct;79(20):6342-6. doi: 10.1073/pnas.79.20.6342.
3
Isolation of a cDNA clone for the murine transplantation antigen H-2Kb.小鼠移植抗原H-2Kb的cDNA克隆的分离
Proc Natl Acad Sci U S A. 1982 May;79(10):3270-4. doi: 10.1073/pnas.79.10.3270.
4
The 48-base-long primordial building block of immunoglobulin light-chain variable regions is complementary to the primordial building block of heavy-chain variable regions.免疫球蛋白轻链可变区48个碱基长的原始构建块与重链可变区的原始构建块互补。
Proc Natl Acad Sci U S A. 1982 Apr;79(7):2338-41. doi: 10.1073/pnas.79.7.2338.
5
Identification of the 48-base-long primordial building block sequence of mouse immunoglobulin variable region genes.小鼠免疫球蛋白可变区基因48个碱基长的原始构建模块序列的鉴定。
Proc Natl Acad Sci U S A. 1982 Mar;79(6):1999-2002. doi: 10.1073/pnas.79.6.1999.
6
A hierarchic arrangement of the repetitive sequences in the Balbiani ring 2 gene of Chironomus tentans.摇蚊唾腺染色体Ⅱ区带基因中重复序列的层次排列
Cell. 1982 Sep;30(2):579-87. doi: 10.1016/0092-8674(82)90254-9.
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Complete nucleotide sequence of mouse immunoglobulin mu gene and comparison with other immunoglobulin heavy chain genes.小鼠免疫球蛋白μ基因的完整核苷酸序列及其与其他免疫球蛋白重链基因的比较。
Nucleic Acids Res. 1980 Sep 11;8(17):3933-45. doi: 10.1093/nar/8.17.3933.
8
Neuronal cell Thy-1 glycoprotein: homology with immunoglobulin.神经元细胞Thy-1糖蛋白:与免疫球蛋白的同源性。
Science. 1982 May 14;216(4547):696-703. doi: 10.1126/science.6177036.