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顺铂与B型DNA十二聚体C-G-C-G-A-A-T-T-C-G-C-G的主要结合模式。

The primary mode of binding of cisplatin to a B-DNA dodecamer: C-G-C-G-A-A-T-T-C-G-C-G.

作者信息

Wing R M, Pjura P, Drew H R, Dickerson R E

出版信息

EMBO J. 1984 May;3(5):1201-6. doi: 10.1002/j.1460-2075.1984.tb01951.x.

DOI:10.1002/j.1460-2075.1984.tb01951.x
PMID:6539674
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC557495/
Abstract

When cisplatin [cis- diamminodichloroplatinum (II)] is diffused into pre-grown crystals of the B-DNA double-helical dodecamer C-G-C-G-A-A-T-T-C-G-C-G, it binds preferentially to the N7 positions of guanines, with what probably is an aquo bridge between Pt and the adjacent O6 atom of the same guanine. The entire guanine ring moves slightly toward the platinum site, into the major groove. Only three of the eight potential cisplatin binding sites on guanines actually are occupied, and this differential reactivity can be explained in terms of the relative freedom of motion of guanines toward the major groove. This shift of guanines upon ligation may weaken the glycosyl bond and assist in the depurination that leads to mismatch SOS repair and G.C. to T.A. transversion.

摘要

当顺铂[顺式二氨二氯铂(II)]扩散到B-DNA双螺旋十二聚体C-G-C-G-A-A-T-T-C-G-C-G预先生长的晶体中时,它优先与鸟嘌呤的N7位结合,铂与同一鸟嘌呤相邻的O6原子之间可能形成一个水桥。整个鸟嘌呤环向铂位点轻微移动,进入大沟。鸟嘌呤上八个潜在的顺铂结合位点中实际上只有三个被占据,这种差异反应性可以用鸟嘌呤向大沟移动的相对运动自由度来解释。连接时鸟嘌呤的这种移动可能会削弱糖苷键,并有助于脱嘌呤,从而导致错配SOS修复以及G.C到T.A的颠换。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/314b/557495/b262e6574ab5/emboj00309-0272-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/314b/557495/091a0a3c9e91/emboj00309-0271-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/314b/557495/b262e6574ab5/emboj00309-0272-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/314b/557495/091a0a3c9e91/emboj00309-0271-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/314b/557495/b262e6574ab5/emboj00309-0272-a.jpg

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本文引用的文献

1
Crystal structure analysis of a complete turn of B-DNA.B型DNA完整一圈的晶体结构分析。
Nature. 1980 Oct 23;287(5784):755-8. doi: 10.1038/287755a0.
2
Structure of a B-DNA dodecamer. III. Geometry of hydration.B型DNA十二聚体的结构。III. 水合作用的几何学
J Mol Biol. 1981 Sep 25;151(3):535-56. doi: 10.1016/0022-2836(81)90009-7.
3
Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG.B-DNA十二聚体中的可逆弯曲和螺旋几何结构:CGCGAATTBrCGCG
一种新型杯[4]吡咯衍生物作为一种潜在的抗癌药物,与 DNA 形成遗传毒性加合物。
Sci Rep. 2018 Jul 23;8(1):11075. doi: 10.1038/s41598-018-29314-9.
4
A DNA structural alphabet provides new insight into DNA flexibility.DNA 结构字母表为 DNA 柔韧性提供了新的见解。
Acta Crystallogr D Struct Biol. 2018 Jan 1;74(Pt 1):52-64. doi: 10.1107/S2059798318000050.
5
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Acta Crystallogr F Struct Biol Commun. 2017 Sep 1;73(Pt 9):500-504. doi: 10.1107/S2053230X17011384. Epub 2017 Aug 14.
6
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Nucleic Acids Res. 2016 Jul 8;44(12):5936-43. doi: 10.1093/nar/gkw367. Epub 2016 May 2.
7
Tandem mass spectrometry for characterization of covalent adducts of DNA with anticancer therapeutics.采用串联质谱法对与抗癌治疗药物发生共价结合的 DNA 进行特征分析。
Mass Spectrom Rev. 2013 Jul-Aug;32(4):247-66. doi: 10.1002/mas.21363. Epub 2012 Nov 13.
8
X-ray structure and mechanism of RNA polymerase II stalled at an antineoplastic monofunctional platinum-DNA adduct.停滞于抗肿瘤单功能铂-DNA加合物处的RNA聚合酶II的X射线结构及作用机制
Proc Natl Acad Sci U S A. 2010 May 25;107(21):9584-9. doi: 10.1073/pnas.1002565107. Epub 2010 May 6.
9
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J Mol Model. 2008 Aug;14(8):705-16. doi: 10.1007/s00894-008-0285-0. Epub 2008 Mar 6.
10
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J Am Chem Soc. 2007 Apr 25;129(16):5023-30. doi: 10.1021/ja067631z. Epub 2007 Apr 3.
J Biol Chem. 1982 Dec 25;257(24):14686-707.
4
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Biochem Biophys Res Commun. 1982 Feb 26;104(4):1394-400. doi: 10.1016/0006-291x(82)91404-8.
5
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6
Structure of a B-DNA dodecamer: conformation and dynamics.一种B型DNA十二聚体的结构:构象与动力学
Proc Natl Acad Sci U S A. 1981 Apr;78(4):2179-83. doi: 10.1073/pnas.78.4.2179.
7
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8
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9
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J Mol Biol. 1983 Jan 5;163(1):129-46. doi: 10.1016/0022-2836(83)90033-5.
10
From Gainesville to Toulouse: the evolution of a model.从盖恩斯维尔到图卢兹:一个模型的演变
Biochimie. 1982 Aug-Sep;64(8-9):549-55. doi: 10.1016/s0300-9084(82)80086-2.