Rice J A, Crothers D M, Pinto A L, Lippard S J
Department of Chemistry, Yale University, New Haven, CT 06511.
Proc Natl Acad Sci U S A. 1988 Jun;85(12):4158-61. doi: 10.1073/pnas.85.12.4158.
We used gel electrophoresis methods to show that reaction of DNA with cis-diamminedichloroplatinum(II) results in a substantial (approximately equal to 40 degrees) bend in the double helix at the intrastrand crosslink between the N7 atoms of adjacent guanosine nucleosides, which bond to the platinum(II) complex with loss of two chloride ions. Multimers of a 22-base-pair (bp) oligonucleotide platinated at a single site show strong anomalies in their electrophoretic mobilities as a consequence of coherent addition of in-phase platinum-induced bends. Increase of the sequence repeat of the platinated site to 27 bp yields multimers of nearly normal mobility because the bends are out of phase. The direction of Pt-induced bends relative to adenosine-tract bends was determined from the electrophoretic mobility of multimers in which repeated platination sites are interdigitated at various phasings relative to repeated adenosine tracts. Optimum bending occurs when 1.5 helical turns separate the cis-Pt(NH3)2[d(pGpG)] adducts from the center of the adenosine tracts. This phasing produces coherent addition of adenosine tract bends toward the minor groove at their centers and Pt-induced bends toward the major groove, where the platinum is located.
我们使用凝胶电泳方法来表明,DNA与顺二氯二氨合铂(II)的反应会导致双螺旋在相邻鸟苷核苷的N7原子之间的链内交联处出现显著(约40°)的弯曲,这些N7原子与铂(II)络合物结合并失去两个氯离子。在单个位点被铂化的22个碱基对(bp)寡核苷酸的多聚体,由于同相铂诱导弯曲的相干叠加,其电泳迁移率呈现出强烈的异常。将铂化位点的序列重复增加到27 bp会产生迁移率近乎正常的多聚体,因为弯曲不同相。通过多聚体的电泳迁移率确定了铂诱导弯曲相对于腺苷序列弯曲的方向,在这些多聚体中,重复的铂化位点相对于重复的腺苷序列以不同的相位相互交错。当1.5个螺旋圈将顺式-Pt(NH3)2[d(pGpG)]加合物与腺苷序列的中心分开时,会出现最佳弯曲。这种相位排列使得腺苷序列在其中心向小沟方向的弯曲和顺铂诱导在铂所在的大沟方向的弯曲相干叠加。