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荧光假单胞菌的进化

Evolution in Pseudomonas fluorescens.

作者信息

Champion A B, Barrett E L, Palleroni N J, Soderberg K L, Kunisawa R, Contopoulou R, Wilson A C, Doudoroff M

出版信息

J Gen Microbiol. 1980 Oct;120(2):485-511. doi: 10.1099/00221287-120-2-485.

Abstract

The relationships among 93 strains of Pseudomonas fluorescens were investigated by (1) a numerical taxonomic analysis on the results of 150 phenotypic tests, (2) DNA hybridization studies using 16 reference strains, (3) quantitative microcomplement fixation studies using six reference strains with antibodies directed against the protein azurin. In general, the strains fell into distinct clusters. Assignment to these clusters on the basis of azurin immunological similarity showed 98% agreement with assignment based on DNA homology, suggesting that many genes will follow the same pattern. Of the strains that clustered on the basis of genotype (DNA, azurin) 88% also clustered on the basis of phenotype. The occasional noncongruency observed between the genotypic and phenotypic data may be due to the variable rates of phenotypic evolution. These results provide a perspective on the roles of horizontal and vertical transfer of genes in the evolution of this bacterial group.

摘要

通过以下方法研究了93株荧光假单胞菌之间的关系:(1)对150项表型测试结果进行数值分类分析;(2)使用16株参考菌株进行DNA杂交研究;(3)使用6株参考菌株,针对蛋白质天青蛋白抗体进行定量微量补体结合研究。总体而言,这些菌株分为不同的簇。基于天青蛋白免疫相似性将菌株归为这些簇,与基于DNA同源性的归类显示出98%的一致性,这表明许多基因将遵循相同的模式。在基于基因型(DNA、天青蛋白)聚类的菌株中,88%也基于表型聚类。基因型和表型数据之间偶尔出现的不一致可能是由于表型进化速率的变化。这些结果为基因水平转移和垂直转移在该细菌群体进化中的作用提供了一个视角。

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