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新生多肽链从大核糖体亚基的出口结构域中出现:新生链的免疫定位

Nascent polypeptide chains emerge from the exit domain of the large ribosomal subunit: immune mapping of the nascent chain.

作者信息

Bernabeu C, Lake J A

出版信息

Proc Natl Acad Sci U S A. 1982 May;79(10):3111-5. doi: 10.1073/pnas.79.10.3111.

DOI:10.1073/pnas.79.10.3111
PMID:6808502
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC346363/
Abstract

The site of the nascent polypeptide chain as it leaves the ribosome has been localized on the "exit domain" of the Escherichia coli ribosome by using IgG antibodies directed against the enzyme beta-galactosidase (EC 3.2.1.23). Thus, a functional site has been mapped on intact 70S ribosomes. The exit site is on the large subunit, approximately 70 A from the interface between subunits and nearly 150 A from the central protuberance, the likely site of peptide transfer. It is adjacent to the region corresponding to the rough endoplasmic membrane binding region of the eukaryotic ribosome but distant from ribosomal components participating in mRNA recognition and polypeptide elongation (i.e., distant from the "translational domain"). These results, together with the protease protection experiments of others, provide evidence that the nascent protein chain probably passes through the ribosome in an unfolded, fully extended conformation.

摘要

利用针对β-半乳糖苷酶(EC 3.2.1.23)的IgG抗体,已将新生多肽链离开核糖体时的位点定位在大肠杆菌核糖体的“出口结构域”上。因此,一个功能位点已在完整的70S核糖体上得以定位。出口位点位于大亚基上,距离亚基间界面约70埃,距离可能的肽转移位点中央突起近150埃。它与真核核糖体粗糙内质网结合区域对应的区域相邻,但距离参与mRNA识别和多肽延伸的核糖体组分较远(即远离“翻译结构域”)。这些结果,连同其他人的蛋白酶保护实验,提供了证据表明新生蛋白质链可能以未折叠、完全伸展的构象穿过核糖体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/95c83bb5de04/pnas00449-0058-e.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/5977348b61ee/pnas00449-0057-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/c2077d4b2c99/pnas00449-0058-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/8974767c5a96/pnas00449-0058-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/7471ea38ee6b/pnas00449-0058-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/7a2e2b5a160c/pnas00449-0058-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/95c83bb5de04/pnas00449-0058-e.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/5977348b61ee/pnas00449-0057-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/c2077d4b2c99/pnas00449-0058-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/8974767c5a96/pnas00449-0058-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/7471ea38ee6b/pnas00449-0058-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/7a2e2b5a160c/pnas00449-0058-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51db/346363/95c83bb5de04/pnas00449-0058-e.jpg

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引用本文的文献

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The ribosome and its role in protein folding: looking through a magnifying glass.核糖体及其在蛋白质折叠中的作用:透过放大镜观察。
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Perspectives on the ribosome.对核糖体的见解。

本文引用的文献

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Isolation and properties of bacteria capable of high rates of beta-galactosidase synthesis.能够高效合成β-半乳糖苷酶的细菌的分离及特性
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INDUCED ENZYME FORMED ON BACTERIAL POLYRIBOSOMES.细菌多核糖体上形成的诱导酶。
Proc Natl Acad Sci U S A. 1964 Jan;51(1):111-8. doi: 10.1073/pnas.51.1.111.
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Studies on the induction of beta-galactosidase in a cryptic strain of Escherichia coli.大肠杆菌隐性菌株中β-半乳糖苷酶诱导作用的研究。
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SecM-stalled ribosomes adopt an altered geometry at the peptidyl transferase center.SecM 停滞的核糖体在肽基转移酶中心采用改变的构象。
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Protein folding by domain V of Escherichia coli 23S rRNA: specificity of RNA-protein interactions.大肠杆菌23S rRNA结构域V介导的蛋白质折叠:RNA-蛋白质相互作用的特异性
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Ligand crowding at a nascent signal sequence.新生信号序列处的配体拥挤现象。
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The path of the growing peptide chain through the 23S rRNA in the 50S ribosomal subunit; a comparative cross-linking study with three different peptide families.50S核糖体亚基中生长肽链通过23S rRNA的途径;与三个不同肽家族的比较交联研究。
Nucleic Acids Res. 1998 Feb 15;26(4):887-95. doi: 10.1093/nar/26.4.887.
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Native 3D structure of eukaryotic 80s ribosome: morphological homology with E. coli 70S ribosome.真核生物80S核糖体的天然三维结构:与大肠杆菌70S核糖体的形态同源性。
J Cell Biol. 1996 May;133(3):495-505. doi: 10.1083/jcb.133.3.495.
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Contacts between the growing peptide chain and the 23S RNA in the 50S ribosomal subunit.正在生长的肽链与50S核糖体亚基中的23S RNA之间的相互作用。
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Reconstitution of the 50 S ribosome subunit. Localization of activities related to the peptidyl transferase centre.50 S核糖体亚基的重组。与肽基转移酶中心相关活性的定位。
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5
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J Mol Biol. 1981 Dec 25;153(4):979-92. doi: 10.1016/0022-2836(81)90462-9.
6
Topography of RNA in the ribosome: location of the 3'-end of 5 S RNA on the central protuberance of the 50 S subunit.核糖体中RNA的拓扑结构:5S RNA 3′端在50S亚基中央突起上的位置。
FEBS Lett. 1980 Nov 17;121(1):97-100. doi: 10.1016/0014-5793(80)81274-9.
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J Cell Biol. 1970 Apr;45(1):130-45. doi: 10.1083/jcb.45.1.130.
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Partial resistance of nascent polypeptide chains to proteolytic digestion due to ribosomal shielding.由于核糖体的屏蔽作用,新生多肽链对蛋白水解消化具有部分抗性。
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Use of Brij lysis as a general method to prepare polyribosomes from Escherichia coli.使用Brij裂解作为从大肠杆菌制备多核糖体的通用方法。
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