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豇豆花叶病毒RNA中首个AUG密码子的位置。

The location of the first AUG codons in cowpea mosaic virus RNAs.

作者信息

Lomonossoff G P, Shanks M, Matthes H D, Singh M, Gait M J

出版信息

Nucleic Acids Res. 1982 Aug 25;10(16):4861-72. doi: 10.1093/nar/10.16.4861.

DOI:10.1093/nar/10.16.4861
PMID:6897113
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC320829/
Abstract

We have made use of the known sequence of the 5' ends of both CPMV RNAs to synthesise an oligodeoxynucleotide which can prime second-strand DNA synthesis on full-length cDNA copies of both RNAs. By priming synthesis in the presence of dideoxynucleoside triphosphates, we have determined the positions of the first AUG codons in each RNA. These occur at positions 115 and 207 on M and B RNA respectively. By using a cloned double-stranded DNA fragment derived from near the 5' end of M RNA as a primer additional sequence from the 5' terminal region of M RNA has been obtained.

摘要

我们利用已知的两种CPMV RNA 5'端序列合成了一种寡聚脱氧核苷酸,该寡聚脱氧核苷酸可引发这两种RNA全长cDNA拷贝上的第二链DNA合成。通过在双脱氧核苷三磷酸存在下引发合成,我们确定了每种RNA中第一个AUG密码子的位置。它们分别出现在M RNA和B RNA的第115位和第207位。通过使用源自M RNA 5'端附近的克隆双链DNA片段作为引物,获得了M RNA 5'末端区域的额外序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73d/320829/c2772c954ce0/nar00385-0042-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73d/320829/293e493a60ae/nar00385-0041-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73d/320829/c2772c954ce0/nar00385-0042-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73d/320829/293e493a60ae/nar00385-0041-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c73d/320829/c2772c954ce0/nar00385-0042-a.jpg

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引用本文的文献

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Nucleic Acids Res. 1983 May 11;11(9):2815-26. doi: 10.1093/nar/11.9.2815.
2
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EMBO J. 1983;2(6):941-6. doi: 10.1002/j.1460-2075.1983.tb01525.x.
3
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本文引用的文献

1
Nucleotide sequence at the 5' extremity of turnip yellow mosaic virus genome RNA.芜菁黄花叶病毒基因组RNA 5'末端的核苷酸序列。
Proc Natl Acad Sci U S A. 1978 Jul;75(7):3168-72. doi: 10.1073/pnas.75.7.3168.
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Complete nucleotide sequence of alfalfa mosaic virus RNA 4.苜蓿花叶病毒RNA 4的完整核苷酸序列
Nucleic Acids Res. 1980 May 24;8(10):2213-23. doi: 10.1093/nar/8.10.2213.
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Complete nucleotide sequence of brome mosaic virus RNA3.雀麦花叶病毒RNA3的完整核苷酸序列。
Nucleic Acids Res. 1983 Mar 11;11(5):1253-65. doi: 10.1093/nar/11.5.1253.
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Pea early browning virus RNA1 encodes four polypeptides including a putative zinc-finger protein.豌豆早褐病毒RNA1编码四种多肽,包括一种假定的锌指蛋白。
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The complete nucleotide sequence of PEBV RNA2 reveals the presence of a novel open reading frame and provides insights into the structure of tobraviral subgenomic promoters.烟草脆裂病毒RNA2的完整核苷酸序列揭示了一个新的开放阅读框的存在,并为烟草花叶病毒亚基因组启动子的结构提供了见解。
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Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomes.侧翼核苷酸在真核生物核糖体识别AUG起始密码子中的可能作用。
Nucleic Acids Res. 1981 Oct 24;9(20):5233-52. doi: 10.1093/nar/9.20.5233.
5
Rapid synthesis of oligodeoxyribonucleotides VI. Efficient, mechanised synthesis of heptadecadeoxyribonucleotides by an improved solid phase phosphotriester route.寡脱氧核糖核苷酸的快速合成VI。通过改进的固相磷三酯路线高效、机械化合成十七聚脱氧核糖核苷酸。
Nucleic Acids Res. 1981 Apr 10;9(7):1691-706. doi: 10.1093/nar/9.7.1691.
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Nucleic Acids Res. 1981 Mar 11;9(5):1087-100. doi: 10.1093/nar/9.5.1087.
7
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