A-DNA的分子静电势和空间可及性
The molecular electrostatic potential and steric accessibility of A-DNA.
作者信息
Lavery R, Pullman B
出版信息
Nucleic Acids Res. 1981 Sep 25;9(18):4677-88. doi: 10.1093/nar/9.18.4677.
Abstract
The molecular electrostatic potential and steric accessibility of A-DNA are computed for base sequences (dG.dC)n and (dA.dT)n. An interpretation of the results in terms of the structure of A-DNA is provided and differences with respect to other forms of DNA, namely B-DNA and Z-DNA, are discussed.
摘要
计算了A-DNA对于碱基序列（dG.dC）n和（dA.dT）n的分子静电势和空间可及性。根据A-DNA的结构对结果进行了解释，并讨论了与其他形式的DNA（即B-DNA和Z-DNA）的差异。
相似文献
1
The molecular electrostatic potential and steric accessibility of A-DNA.A-DNA的分子静电势和空间可及性
Nucleic Acids Res. 1981 Sep 25;9(18):4677-88. doi: 10.1093/nar/9.18.4677.
2
The molecular electrostatic potential and steric accessibility of poly (dA-dT). poly (dA-dT) in various conformations: B-DNA, D-DNA and 'alternating-B' DNA.聚（dA-dT）·聚（dA-dT）在不同构象（B-DNA、D-DNA和“交替B”DNA）下的分子静电势和空间可及性。
Nucleic Acids Res. 1981 Dec 11;9(23):6539-52. doi: 10.1093/nar/9.23.6539.
3
The molecular electrostatic potential, steric accessibility and hydration of Dickerson's B-DNA dodecamer d(CpGpCpGpApApTpTpCpGpCpG).迪克森B型DNA十二聚体d（CpGpCpGpApApTpTpCpGpCpG）的分子静电势、空间可及性和水合作用
Nucleic Acids Res. 1981 Aug 11;9(15):3765-77. doi: 10.1093/nar/9.15.3765.
4
Conformational peculiarities of polynucleotides with a nonrandom base sequence according to the 1H----3H exchange rate in C8H groups of purinic residues.根据嘌呤残基C8H基团中1H→3H的交换率，具有非随机碱基序列的多核苷酸的构象特性。
J Biomol Struct Dyn. 1987 Dec;5(3):601-14. doi: 10.1080/07391102.1987.10506415.
5
The sequence (dC-dA)n X (dG-dT)n forms left-handed Z-DNA in negatively supercoiled plasmids.序列（dC-dA）n×（dG-dT）n在负超螺旋质粒中形成左手Z-DNA。
Proc Natl Acad Sci U S A. 1983 Apr;80(7):1821-5. doi: 10.1073/pnas.80.7.1821.
6
Left-handed Z-DNA helices in polymers, restriction fragments, and recombinant plasmids.聚合物、限制性片段和重组质粒中的左手Z-DNA螺旋。
J Biomol Struct Dyn. 1983 Dec;1(4):999-1009. doi: 10.1080/07391102.1983.10507498.
7
Preferential binding of the chemical carcinogen N-hydroxy-2-aminofluorene to B-DNA as compared to Z-DNA.与Z-DNA相比，化学致癌物N-羟基-2-氨基芴对B-DNA的优先结合。
Nucleic Acids Res. 1983 Jul 25;11(14):4947-56. doi: 10.1093/nar/11.14.4947.
8
Conformational variability of poly(dA-dT).poly(dA-dT) and some other deoxyribonucleic acids includes a novel type of double helix.聚（dA-dT）·聚（dA-dT）及其他一些脱氧核糖核酸的构象变异性包括一种新型双螺旋结构。
J Biomol Struct Dyn. 1985 Aug;3(1):67-83. doi: 10.1080/07391102.1985.10508399.
9
High affinity binding of estrogen receptor to recombinant plasmids containing (dA-dC)n.(dG-dT)n sequences.雌激素受体与含有(dA-dC)n.(dG-dT)n序列的重组质粒的高亲和力结合。
Cancer Res. 1989 Sep 1;49(17):4734-9.
10
Polyamine-induced Z-DNA conformation in plasmids containing (dA-dC)n.(dG-dT)n inserts and increased binding of lupus autoantibodies to the Z-DNA form of plasmids.多胺诱导含（dA-dC）n·（dG-dT）n插入片段的质粒形成Z-DNA构象，并增强狼疮自身抗体与质粒Z-DNA形式的结合。
Biochem J. 1994 Mar 1;298 ( Pt 2)(Pt 2):485-91. doi: 10.1042/bj2980485.
引用本文的文献
1
Ionic magnetic core-shell nanoparticles for DNA extraction.用于DNA提取的离子磁性核壳纳米颗粒。
RSC Adv. 2020 Oct 23;10(64):38818-38830. doi: 10.1039/d0ra05933a. eCollection 2020 Oct 21.
2
Recognition of the spliceosomal branch site RNA helix on the basis of surface and electrostatic features.基于表面和静电特征识别剪接体分支位点RNA螺旋结构
Nucleic Acids Res. 2005 Feb 23;33(4):1154-61. doi: 10.1093/nar/gki249. Print 2005.
3
Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.六水合镁离子结合在A-型核酸双链体的深主沟和外口处。
Nucleic Acids Res. 2000 Apr 15;28(8):1760-6. doi: 10.1093/nar/28.8.1760.
4
The electrostatic field of DNA: the role of the nucleic acid conformation.DNA的静电场：核酸构象的作用。
Nucleic Acids Res. 1982 Jul 24;10(14):4383-95. doi: 10.1093/nar/10.14.4383.
5
Ternary interactions of spermine with DNA: 4'-epiadriamycin and other DNA: anthracycline complexes.精胺与DNA的三元相互作用：4'-表阿霉素及其他DNA：蒽环类复合物
Nucleic Acids Res. 1990 Sep 25;18(18):5533-41. doi: 10.1093/nar/18.18.5533.
6
Properties of pseudouridine N1 imino protons located in the major groove of an A-form RNA duplex.位于A-型RNA双链体大沟中的假尿苷N1亚氨基质子的性质。
Nucleic Acids Res. 1992 Apr 25;20(8):1883-9. doi: 10.1093/nar/20.8.1883.
本文引用的文献
1
Molecular configuration in sodium thymonucleate.胸腺核苷酸钠中的分子构型。
Nature. 1953 Apr 25;171(4356):740-1. doi: 10.1038/171740a0.
2
Left-handed double helical DNA: variations in the backbone conformation.左手双螺旋DNA：主链构象的变化
Science. 1981 Jan 9;211(4478):171-6. doi: 10.1126/science.7444458.
3
The electrostatic potential and steric accessibility of reactive sites within Z-DNA.Z-DNA 内反应位点的静电势和空间可及性。
Nucleic Acids Res. 1980 Sep 11;8(17):3917-32. doi: 10.1093/nar/8.17.3917.
4
High-salt d(CpGpCpG), a left-handed Z' DNA double helix.高盐条件下的d（CpGpCpG），一种左手Z'型DNA双螺旋结构。
Nature. 1980 Aug 7;286(5773):567-73. doi: 10.1038/286567a0.
5
Left-handed DNA helices.左手DNA螺旋
Nature. 1980 Feb 21;283(5749):743-5. doi: 10.1038/283743a0.
6
The electrostatic molecular potential of tRNAPhe. IV. The potentials and steric accessibilities of sites associated with the bases.苯丙氨酸转运核糖核酸的静电分子势。IV. 与碱基相关位点的势和空间可及性
Nucleic Acids Res. 1980 Nov 11;8(21):5095-111. doi: 10.1093/nar/8.21.5095.
7
Temperature mediated variation of DNA secondary structure in (A.T) clusters; evidence by use of the oligopeptide netropsin as a structural probe.（A.T）簇中DNA二级结构的温度介导变异；使用寡肽纺锤菌素作为结构探针的证据
Nucleic Acids Res. 1981 May 25;9(10):2335-49. doi: 10.1093/nar/9.10.2335.
8
Optimised parameters for A-DNA and B-DNA.A-DNA和B-DNA的优化参数。
Biochem Biophys Res Commun. 1972 Jun 28;47(6):1504-9. doi: 10.1016/0006-291X(72)90243-4.
9
Letter: The structure of polydeoxyguanylic acid with polydeoxycytidylic acid.信函：聚脱氧鸟苷酸与聚脱氧胞苷酸的结构
J Mol Biol. 1974 Sep 15;88(2):551-2. doi: 10.1016/0022-2836(74)90502-6.
10
The nature of the B-A transition of DNA in solution.溶液中DNA的B-A转变的本质。
FEBS Lett. 1975 Mar 1;51(1):38-42. doi: 10.1016/0014-5793(75)80850-7.
Zotero 插件