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从甲醛处理的核酸中分离和鉴定交联物。

Isolation and identification of cross-links from formaldehyde-treated nucleic acids.

作者信息

Chaw Y F, Crane L E, Lange P, Shapiro R

出版信息

Biochemistry. 1980 Nov 25;19(24):5525-31. doi: 10.1021/bi00565a010.

DOI:10.1021/bi00565a010
PMID:7459328
Abstract

Cross-linked nucleosides have been isolated from formaldehyde-treated ribonucleic acid (RNA) and deoxyribonucleic acid (DNA) by using reverse-phase high-pressure liquid chromatography. Methylene-bridged products containing cytosine, as well as the purines, have been isolated. A combination of ultraviolet and nuclear magnetic resonance (NMR) spectra, pKa values, hydrolysis, and reduction has been used to establish that the cross-links connect the amino groups of the nucleosides involved. For example, the 6-amino functions of two adenosine residues are linked by a methylene bridge to produce a compound which, when dissolved in deuterated dimethyl sulfoxide, displays 11 unsplit resonances in its proton-decoupled 13C NMR spectrum. The procedure reported here is more rapid and less laborious than an earlier one recommended by us for the isolation of cross-linked products from DNA [Dubelman, S., & Shapiro, R. (1977) Nucleic Acids Res. 4, 1815-1827]. This new approach may be of value in the study of other types of cross-linking reactions involving nucleic acids.

摘要

通过反相高压液相色谱法,已从甲醛处理过的核糖核酸(RNA)和脱氧核糖核酸(DNA)中分离出交联核苷。已分离出含有胞嘧啶以及嘌呤的亚甲基桥连产物。利用紫外光谱和核磁共振(NMR)光谱、pKa值、水解和还原等方法,确定交联连接了相关核苷的氨基。例如,两个腺苷残基的6-氨基官能团通过亚甲基桥相连,生成一种化合物,该化合物溶解于氘代二甲基亚砜中时,在其质子去耦13C NMR光谱中显示出11个未分裂的共振峰。此处报道的方法比我们之前推荐的从DNA中分离交联产物的方法[Dubelman, S., & Shapiro, R. (1977) Nucleic Acids Res. 4, 1815 - 1827]更快且更省力。这种新方法可能在涉及核酸的其他类型交联反应研究中具有价值。

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