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RNA聚合酶的内在转录物切割活性。

Intrinsic transcript cleavage activity of RNA polymerase.

作者信息

Orlova M, Newlands J, Das A, Goldfarb A, Borukhov S

机构信息

Public Health Research Institute, New York, NY 10016, USA.

出版信息

Proc Natl Acad Sci U S A. 1995 May 9;92(10):4596-600. doi: 10.1073/pnas.92.10.4596.

DOI:10.1073/pnas.92.10.4596
PMID:7538676
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC41991/
Abstract

The GreA and GreB transcript cleavage factors of Escherichia coli suppress elongation arrest and may have a proofreading role in transcription. With the use of E. coli greA-greB- mutant, RNA polymerase is demonstrated to possess substantial intrinsic transcript cleavage activity. Mildly alkaline pH mimics the effect of the Gre proteins by inducing transcript cleavage in ternary complexes and antagonizing elongation arrest through a cleavage-and-restart reaction. Thus, transcript cleavage constitutes the second enzymological activity of RNA polymerase along with polymerization/pyrophosphorolysis of RNA, whereas the Gre proteins merely enhance this intrinsic property.

摘要

大肠杆菌的GreA和GreB转录物切割因子可抑制延伸停滞,并且可能在转录过程中具有校对作用。利用大肠杆菌greA - greB - 突变体,证明RNA聚合酶具有相当大的内在转录物切割活性。轻度碱性pH通过诱导三元复合物中的转录物切割并通过切割和重新启动反应拮抗延伸停滞,从而模拟Gre蛋白的作用。因此,转录物切割与RNA的聚合/焦磷酸解一起构成了RNA聚合酶的第二种酶学活性,而Gre蛋白只是增强了这种内在特性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/94e6213eeb17/pnas01486-0535-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/4b4fb0c6d7e5/pnas01486-0533-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/71a338b710e9/pnas01486-0534-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/7e9bb3d61cf8/pnas01486-0534-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/94e6213eeb17/pnas01486-0535-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/4b4fb0c6d7e5/pnas01486-0533-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/71a338b710e9/pnas01486-0534-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/7e9bb3d61cf8/pnas01486-0534-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9c/41991/94e6213eeb17/pnas01486-0535-a.jpg

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Proc Natl Acad Sci U S A. 1962 Jan 15;48(1):81-94. doi: 10.1073/pnas.48.1.81.
2
The increment of SII-facilitated transcript cleavage varies dramatically between elongation competent and incompetent RNA polymerase II ternary complexes.SII促进的转录本切割的增量在具有延伸能力和不具有延伸能力的RNA聚合酶II三元复合物之间差异巨大。
J Biol Chem. 1993 Jun 15;268(17):12874-85.
3
Transcript cleavage factors from E. coli.
一氧化氮胁迫下 Gre 因子缺失导致表型异质性和欺骗行为的产生。
mBio. 2024 Oct 16;15(10):e0222924. doi: 10.1128/mbio.02229-24. Epub 2024 Sep 9.
4
Transcription elongation of the plant RNA polymerase IV is prone to backtracking.植物 RNA 聚合酶 IV 的转录延伸容易出现回溯。
Sci Adv. 2024 Aug 23;10(34):eadq3087. doi: 10.1126/sciadv.adq3087.
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RNA polymerase collisions and their role in transcription.RNA 聚合酶碰撞及其在转录中的作用。
Transcription. 2024 Feb-Apr;15(1-2):38-47. doi: 10.1080/21541264.2024.2316972. Epub 2024 Feb 15.
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Protein-Ligand Interactions in Scarcity: The Stringent Response from Bacteria to Metazoa, and the Unanswered Questions.蛋白质-配体相互作用在稀缺中:从细菌到后生动物的严格反应,以及未解决的问题。
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