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Tn10转座早期中间体——切割前突触复合体的鉴定与表征

Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition.

作者信息

Sakai J, Chalmers R M, Kleckner N

机构信息

Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.

出版信息

EMBO J. 1995 Sep 1;14(17):4374-83. doi: 10.1002/j.1460-2075.1995.tb00112.x.

DOI:10.1002/j.1460-2075.1995.tb00112.x
PMID:7556079
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC394522/
Abstract

The Tn10 transposition reaction has been reconstituted in vitro on short linear substrate fragments encoding transposon ends. This permits the direct detection of protein-DNA complexes formed during transposition by gel retardation analysis. We demonstrate that a stable synaptic complex containing transposase and a pair of transposon ends forms rapidly and efficiently, prior and prerequisite to the double-strand cleavages involved in transposon excision. These observations extend the general analogies between the Tn10 and Mu transposition reactions, and also reveal significant differences between the two cases. The speed and simplicity of synaptic complex formation in the Tn10/IS10 reaction is suitable for a modular insertion sequence. In contrast, the relative slowness and complexity of this process in the Mu is necessary to permit transposition immunity and control of transposition by Mu repressor protein, two features specifically important for a temperate bacteriophage. Further dissection of the reaction leads to a tentative working model for events preceding the first double-strand cleavage.

摘要

Tn10转座反应已在体外于编码转座子末端的短线性底物片段上重建。这使得通过凝胶阻滞分析能够直接检测转座过程中形成的蛋白质-DNA复合物。我们证明,在转座子切除所涉及的双链切割之前且作为其先决条件,一种包含转座酶和一对转座子末端的稳定突触复合物能快速且高效地形成。这些观察结果扩展了Tn10和Mu转座反应之间的一般相似性,同时也揭示了两者之间的显著差异。Tn10/IS10反应中突触复合物形成的速度和简易性适合于模块化插入序列。相比之下,Mu反应中这一过程的相对缓慢和复杂对于实现转座免疫以及由Mu阻遏蛋白控制转座是必要的,这两个特征对于温和噬菌体尤为重要。对该反应的进一步剖析得出了第一个双链切割之前事件的初步工作模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/ab87888d07cd/emboj00041-0267-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/840ce7a1c623/emboj00041-0263-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/d7c377f366e8/emboj00041-0263-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/6c486b2f22ba/emboj00041-0264-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/8d1a9a6c9e36/emboj00041-0264-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/b7db1d298051/emboj00041-0265-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/dcc0da0e6a19/emboj00041-0266-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/0c7666bd147b/emboj00041-0266-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/ab87888d07cd/emboj00041-0267-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/840ce7a1c623/emboj00041-0263-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/d7c377f366e8/emboj00041-0263-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/6c486b2f22ba/emboj00041-0264-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/8d1a9a6c9e36/emboj00041-0264-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/b7db1d298051/emboj00041-0265-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/dcc0da0e6a19/emboj00041-0266-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/0c7666bd147b/emboj00041-0266-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7ddb/394522/ab87888d07cd/emboj00041-0267-a.jpg

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引用本文的文献

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A single active site in the mariner transposase cleaves DNA strands of opposite polarity.水手转座酶中的单个活性位点可切割相反极性的DNA链。
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3
DNA-PK facilitates transposition by promoting paired-end complex formation.DNA-PK 通过促进末端配对复合物的形成来促进转座。

本文引用的文献

1
Division of labor among monomers within the Mu transposase tetramer.Mu转座酶四聚体内单体之间的分工。
Cell. 1993 Aug 27;74(4):723-33. doi: 10.1016/0092-8674(93)90519-v.
2
Tn7 transposition: target DNA recognition is mediated by multiple Tn7-encoded proteins in a purified in vitro system.Tn7转座:在体外纯化系统中,靶DNA识别由多种Tn7编码蛋白介导。
Cell. 1993 Mar 26;72(6):931-43. doi: 10.1016/0092-8674(93)90581-a.
3
Interaction of Tn5 transposase with the transposon termini.Tn5转座酶与转座子末端的相互作用。
Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):7408-7413. doi: 10.1073/pnas.1612980114. Epub 2017 Jun 23.
4
Active recombinant Tol2 transposase for gene transfer and gene discovery applications.用于基因转移和基因发现应用的活性重组Tol2转座酶。
Mob DNA. 2016 Mar 31;7:6. doi: 10.1186/s13100-016-0062-z. eCollection 2016.
5
An Atypical AAA+ ATPase Assembly Controls Efficient Transposition through DNA Remodeling and Transposase Recruitment.一种非典型AAA+ ATP酶组装体通过DNA重塑和转座酶招募来控制高效转座。
Cell. 2015 Aug 13;162(4):860-71. doi: 10.1016/j.cell.2015.07.037.
6
Transposition of a rice Mutator-like element in the yeast Saccharomyces cerevisiae.水稻类Mutator元件在酿酒酵母中的转座。
Plant Cell. 2015 Jan;27(1):132-48. doi: 10.1105/tpc.114.128488. Epub 2015 Jan 13.
7
The emerging diversity of transpososome architectures.转座子复合物结构的新兴多样性。
Q Rev Biophys. 2012 Nov;45(4):493-521. doi: 10.1017/S0033583512000145.
8
H-NS mediates the dissociation of a refractory protein-DNA complex during Tn10/IS10 transposition.H-NS 介导 Tn10/IS10 转座过程中抗性蛋白-DNA 复合物的解离。
Nucleic Acids Res. 2011 Aug;39(15):6660-8. doi: 10.1093/nar/gkr309. Epub 2011 May 11.
9
A simple topological filter in a eukaryotic transposon as a mechanism to suppress genome instability.真核转座子中的简单拓扑过滤器作为抑制基因组不稳定性的机制。
Mol Cell Biol. 2011 Jan;31(2):317-27. doi: 10.1128/MCB.01066-10. Epub 2010 Nov 1.
10
DDE transposases: Structural similarity and diversity.DDE 转座酶:结构的相似性和多样性。
Adv Drug Deliv Rev. 2010 Sep 30;62(12):1187-95. doi: 10.1016/j.addr.2010.06.006. Epub 2010 Jul 6.
J Mol Biol. 1994 Jan 14;235(2):486-95. doi: 10.1006/jmbi.1994.1008.
4
Tn10/IS10 transposase purification, activation, and in vitro reaction.Tn10/IS10转座酶的纯化、激活及体外反应。
J Biol Chem. 1994 Mar 18;269(11):8029-35.
5
Negative and positive regulation of Tn10/IS10-promoted recombination by IHF: two distinguishable processes inhibit transposition off of multicopy plasmid replicons and activate chromosomal events that favor evolution of new transposons.整合宿主因子(IHF)对Tn10/IS10促进的重组的负调控和正调控:两个可区分的过程抑制多拷贝质粒复制子上的转座并激活有利于新转座子进化的染色体事件。
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6
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7
Site-specific recognition of the bacteriophage Mu ends by the Mu A protein.噬菌体Mu末端由Mu A蛋白进行位点特异性识别。
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J Mol Biol. 1988 Sep 5;203(1):131-9. doi: 10.1016/0022-2836(88)90097-6.
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J Bacteriol. 1987 Sep;169(9):4388-90. doi: 10.1128/jb.169.9.4388-4390.1987.