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重组热点chi通过将大肠杆菌转变为recD突变体表型模拟物来激活RecBCD重组。

The recombination hot spot chi activates RecBCD recombination by converting Escherichia coli to a recD mutant phenocopy.

作者信息

Myers R S, Kuzminov A, Stahl F W

机构信息

Institute of Molecular Biology, University of Oregon, Eugene 97403-1229, USA.

出版信息

Proc Natl Acad Sci U S A. 1995 Jul 3;92(14):6244-8. doi: 10.1073/pnas.92.14.6244.

DOI:10.1073/pnas.92.14.6244
PMID:7603978
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC41494/
Abstract

The products of the recB and recC genes are necessary for conjugal recombination and for repair of chromosomal double-chain breaks in Escherichia coli. The recD gene product combines with the RecB and RecC proteins to comprise RecBCD enzyme but is required for neither recombination nor repair. On the contrary, RecBCD enzyme is an exonuclease that inhibits recombination by destroying linear DNA. The RecD ejection model proposes that RecBCD enzyme enters a DNA duplex at a double-chain end and travels destructively until it encounters the recombination hot spot sequence chi. Chi then alters the RecBCD enzyme by weakening the affinity of the RecD subunit for the RecBC heterodimer. With the loss of the RecD subunit, the resulting protein, RecBC(D-), becomes deficient for exonuclease activity and proficient as a recombinagenic helicase. To test the model, genetic crosses between lambda phage were conducted in cells containing chi on a nonhomologous plasmid. Upon delivering a double-chain break to the plasmid, lambda recombined as if the cells had become recD mutants. The ability of chi to alter lambda recombination in trans was reversed by overproducing the RecD subunit. These results indicate that chi can influence a recombination act without directly participating in it.

摘要

recB和recC基因的产物对于大肠杆菌中的接合重组和染色体双链断裂的修复是必需的。recD基因产物与RecB和RecC蛋白结合组成RecBCD酶,但对于重组和修复均非必需。相反,RecBCD酶是一种核酸外切酶,通过破坏线性DNA来抑制重组。RecD排出模型提出,RecBCD酶在双链末端进入DNA双链并进行破坏性移动,直到遇到重组热点序列chi。然后,chi通过削弱RecD亚基对RecBC异二聚体的亲和力来改变RecBCD酶。随着RecD亚基的丢失,产生的蛋白RecBC(D-)核酸外切酶活性不足,但作为重组解旋酶活性增强。为了验证该模型,在非同源质粒上含有chi的细胞中进行了λ噬菌体之间的遗传杂交。当给质粒造成双链断裂时,λ噬菌体发生重组,就好像细胞变成了recD突变体一样。通过过量表达RecD亚基可逆转chi在反式作用中改变λ噬菌体重组的能力。这些结果表明,chi可以在不直接参与的情况下影响重组过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce2d/41494/d0375a5e2677/pnas01490-0039-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce2d/41494/d0375a5e2677/pnas01490-0039-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce2d/41494/d0375a5e2677/pnas01490-0039-a.jpg

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The recombination hot spot chi activates RecBCD recombination by converting Escherichia coli to a recD mutant phenocopy.重组热点chi通过将大肠杆菌转变为recD突变体表型模拟物来激活RecBCD重组。
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本文引用的文献

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The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme.重组热点chi是一种调控序列,其作用是减弱大肠杆菌RecBCD酶的核酸酶活性。
Cell. 1993 Apr 9;73(1):87-96. doi: 10.1016/0092-8674(93)90162-j.
2
Reversible inactivation of the Escherichia coli RecBCD enzyme by the recombination hotspot chi in vitro: evidence for functional inactivation or loss of the RecD subunit.体外重组热点chi对大肠杆菌RecBCD酶的可逆失活作用:RecD亚基功能失活或缺失的证据
Proc Natl Acad Sci U S A. 1994 Apr 12;91(8):2980-4. doi: 10.1073/pnas.91.8.2980.
3
Chi sites in combination with RecA protein increase the survival of linear DNA in Escherichia coli by inactivating exoV activity of RecBCD nuclease.
RecBCD 酶:从复杂解旋酶-核酸酶的突变体中获得的机制见解。
Microbiol Mol Biol Rev. 2023 Dec 20;87(4):e0004123. doi: 10.1128/mmbr.00041-23. Epub 2023 Dec 4.
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RecBCD enzyme and Chi recombination hotspots as determinants of self vs. non-self: Myths and mechanisms.RecBCD 酶和 Chi 重组热点作为自我与非我的决定因素:神话与机制。
Adv Genet. 2022;109:1-37. doi: 10.1016/bs.adgen.2022.06.001. Epub 2022 Sep 2.
5
DNA Helicases.DNA解旋酶
EcoSal Plus. 2010 Sep;4(1). doi: 10.1128/ecosalplus.4.4.8.
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RecBCD is required to complete chromosomal replication: Implications for double-strand break frequencies and repair mechanisms.RecBCD蛋白是完成染色体复制所必需的:对双链断裂频率和修复机制的影响。
DNA Repair (Amst). 2015 Aug;32:86-95. doi: 10.1016/j.dnarep.2015.04.018. Epub 2015 May 2.
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How RecBCD enzyme and Chi promote DNA break repair and recombination: a molecular biologist's view.RecBCD 酶和 Chi 如何促进 DNA 断裂修复和重组:分子生物学家的观点。
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RecBCD enzyme and the repair of double-stranded DNA breaks.RecBCD酶与双链DNA断裂的修复
Microbiol Mol Biol Rev. 2008 Dec;72(4):642-71, Table of Contents. doi: 10.1128/MMBR.00020-08.
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Single molecule studies of homologous recombination.同源重组的单分子研究
Mol Biosyst. 2008 Nov;4(11):1094-104. doi: 10.1039/b811681b. Epub 2008 Sep 29.
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Physical analyses of E. coli heteroduplex recombination products in vivo: on the prevalence of 5' and 3' patches.大肠杆菌体内异源双链重组产物的物理分析:关于5'和3'片段的普遍性
PLoS One. 2007 Nov 28;2(11):e1242. doi: 10.1371/journal.pone.0001242.
Chi位点与RecA蛋白结合,通过使RecBCD核酸酶的exoV活性失活来提高线性DNA在大肠杆菌中的存活率。
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Chi and the RecBC D enzyme of Escherichia coli.大肠杆菌的Chi序列与RecBC D酶
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Structure of chi hotspots of generalized recombination.广义重组的chi热点结构
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6
Directionality and nonreciprocality of Chi-stimulated recombination in phage lambda.噬菌体λ中Chi刺激重组的方向性和非互惠性
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A new class of Escherichia coli recBC mutants: implications for the role of RecBC enzyme in homologous recombination.一类新型大肠杆菌recBC突变体:RecBC酶在同源重组中的作用探讨
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8
Orientation of cohesive end site cos determines the active orientation of chi sequence in stimulating recA . recBC-mediated recombination in phage lambda lytic infections.粘性末端位点cos的方向决定了chi序列在噬菌体λ裂解感染中刺激recA.recBC介导的重组时的活性方向。
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Activation of Chi, a recombinator, by the action of an endonuclease at a distant site.内切核酸酶在远处位点的作用激活重组酶Chi。
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10
The mechanism of the chi-cos interaction in RecA-RecBC-mediated recombination in phage lambda.噬菌体λ中RecA-RecBC介导的重组中chi-cos相互作用的机制。
Cold Spring Harb Symp Quant Biol. 1984;49:497-506. doi: 10.1101/sqb.1984.049.01.056.