与菜豆形成根瘤的根瘤菌属物种的系统发育关系和宿主范围
Phylogenetic relationships and host range of Rhizobium spp. that nodulate Phaseolus vulgaris L.
作者信息
Hernandez-Lucas I, Segovia L, Martinez-Romero E, Pueppke S G
机构信息
Centro de Investigación sobre Fijación de Nitrogeno, Universidad Nacional Autónoma de México, Cuernavaca, Morelos.
出版信息
Appl Environ Microbiol. 1995 Jul;61(7):2775-9. doi: 10.1128/aem.61.7.2775-2779.1995.
Abstract
We determined the nucleotide sequences of 16S rRNA gene segments from five Rhizobium strains that have been isolated from tropical legume species. All share the capacity to nodulate Phaseolus vulgaris L., the common bean. Phylogenetic analysis confirmed that these strains are of two different chromosomal lineages. We defined the host ranges of two strains of Rhizobium etli and three strains of R. tropici, comparing them with those of the two most divergently related new strains. Twenty-two of the 43 tested legume species were nodulated by three or more of these strains. All seven strains have broad host ranges that include woody species such as Albizia lebbeck, Gliricidia maculata, and Leucaena leucocephala.
摘要
我们测定了从热带豆科植物中分离出的5株根瘤菌菌株16S rRNA基因片段的核苷酸序列。所有菌株都具有使菜豆（Phaseolus vulgaris L.）结瘤的能力。系统发育分析证实这些菌株属于两个不同的染色体谱系。我们确定了两株埃氏根瘤菌（Rhizobium etli）和三株热带根瘤菌（R. tropici）的宿主范围，并将它们与另外两株亲缘关系差异最大的新菌株进行比较。在所测试的43种豆科植物中，有22种能被其中三种或更多菌株结瘤。所有七株菌株都具有广泛的宿主范围，包括诸如阔荚合欢（Albizia lebbeck）、巴西苏木（Gliricidia maculata）和银合欢（Leucaena leucocephala）等木本植物。
相似文献
1
Phylogenetic relationships and host range of Rhizobium spp. that nodulate Phaseolus vulgaris L.与菜豆形成根瘤的根瘤菌属物种的系统发育关系和宿主范围
Appl Environ Microbiol. 1995 Jul;61(7):2775-9. doi: 10.1128/aem.61.7.2775-2779.1995.
2
Phylogenetic relationships among Rhizobium species nodulating the common bean (Phaseolus vulgaris L.).根瘤菌属中与菜豆（Phaseolus vulgaris L.）结瘤的物种间的系统发育关系。
Int J Syst Bacteriol. 1996 Jan;46(1):240-4. doi: 10.1099/00207713-46-1-240.
3
Genomic heterogeneity among French Rhizobium strains isolated from Phaseolus vulgaris L.从菜豆中分离出的法国根瘤菌菌株间的基因组异质性
Int J Syst Bacteriol. 1993 Oct;43(4):761-7. doi: 10.1099/00207713-43-4-761.
4
Phylogenetic position of Rhizobium sp. strain Or 191, a symbiont of both Medicago sativa and Phaseolus vulgaris, based on partial sequences of the 16S rRNA and nifH genes.基于16S rRNA和nifH基因部分序列的苜蓿和菜豆共生菌根瘤菌属菌株Or 191的系统发育位置。
Appl Environ Microbiol. 1992 Jun;58(6):1809-15. doi: 10.1128/aem.58.6.1809-1815.1992.
5
Rhizobium lusitanum sp. nov. a bacterium that nodulates Phaseolus vulgaris.卢西塔尼亚根瘤菌新种，一种能使菜豆结瘤的细菌。
Int J Syst Evol Microbiol. 2006 Nov;56(Pt 11):2631-2637. doi: 10.1099/ijs.0.64402-0.
6
Genetic characterization of Rhizobium sp. strain TAL1145 that nodulates tree legumes.能使木本豆科植物结瘤的根瘤菌属菌株TAL1145的遗传特征分析
Can J Microbiol. 1994 Mar;40(3):208-15. doi: 10.1139/m94-034.
7
Rhizobium multihospitium sp. nov., isolated from multiple legume species native of Xinjiang, China.多宿主根瘤菌新种，从中国新疆本土多种豆科植物中分离得到。
Int J Syst Evol Microbiol. 2008 Jul;58(Pt 7):1693-9. doi: 10.1099/ijs.0.65568-0.
8
Rhizobium tropici, a novel species nodulating Phaseolus vulgaris L. beans and Leucaena sp. trees.热带根瘤菌，一种能使菜豆和银合欢属树木结瘤的新物种。
Int J Syst Bacteriol. 1991 Jul;41(3):417-26. doi: 10.1099/00207713-41-3-417.
9
Rhizobium gallicum sp. nov. and Rhizobium giardinii sp. nov., from Phaseolus vulgaris nodules.来自菜豆根瘤的新种高卢根瘤菌和新种贾氏根瘤菌。
Int J Syst Bacteriol. 1997 Oct;47(4):996-1006. doi: 10.1099/00207713-47-4-996.
10
Species limits in Rhizobium populations that nodulate the common bean (Phaseolus vulgaris).根瘤菌种群中与菜豆（Phaseolus vulgaris）形成根瘤的物种界限。
Appl Environ Microbiol. 1995 Feb;61(2):507-12. doi: 10.1128/aem.61.2.507-512.1995.
引用本文的文献
1
The Gene of HH103 Restores Nodulation Capacity on Bean in a CIAT 899 / Mutant, but the Secondary Symbiotic Regulators , or Prevent HH103 to Nodulate with This Legume.HH103基因可恢复CIAT 899突变体在菜豆上的结瘤能力，但次生共生调节因子会阻止HH103与这种豆科植物结瘤。
Microorganisms. 2022 Jan 10;10(1):139. doi: 10.3390/microorganisms10010139.
2
Genome Editing in Cowpea Using CRISPR-Cas9.利用 CRISPR-Cas9 编辑豇豆花椰菜基因组。
Int J Mol Sci. 2019 May 19;20(10):2471. doi: 10.3390/ijms20102471.
3
The Rhizobia- Symbioses: Deeply Specific and Widely Diverse.根瘤菌共生：高度特异性且广泛多样。
Front Microbiol. 2018 Sep 12;9:2055. doi: 10.3389/fmicb.2018.02055. eCollection 2018.
4
NrcR, a New Transcriptional Regulator of Rhizobium tropici CIAT 899 Involved in the Legume Root-Nodule Symbiosis.NrcR，热带根瘤菌CIAT 899中参与豆科植物根瘤共生的一种新型转录调节因子。
PLoS One. 2016 Apr 20;11(4):e0154029. doi: 10.1371/journal.pone.0154029. eCollection 2016.
5
Opening the "black box" of nodD3, nodD4 and nodD5 genes of Rhizobium tropici strain CIAT 899.打开热带根瘤菌CIAT 899菌株的nodD3、nodD4和nodD5基因的“黑匣子”。
BMC Genomics. 2015 Oct 26;16:864. doi: 10.1186/s12864-015-2033-z.
6
Phylogeny of Symbiotic Genes and the Symbiotic Properties of Rhizobia Specific to Astragalus glycyphyllos L.甘草紫云英共生基因的系统发育及根瘤菌的共生特性
PLoS One. 2015 Oct 23;10(10):e0141504. doi: 10.1371/journal.pone.0141504. eCollection 2015.
7
Regulatory nodD1 and nodD2 genes of Rhizobium tropici strain CIAT 899 and their roles in the early stages of molecular signaling and host-legume nodulation.热带根瘤菌CIAT 899菌株的调节基因nodD1和nodD2及其在分子信号传导和宿主豆科植物结瘤早期阶段的作用。
BMC Genomics. 2015 Mar 28;16(1):251. doi: 10.1186/s12864-015-1458-8.
8
Nitrogen-fixing rhizobial strains isolated from common bean seeds: phylogeny, physiology, and genome analysis.从菜豆种子中分离出的固氮根瘤菌菌株：系统发育、生理学及基因组分析
Appl Environ Microbiol. 2014 Sep;80(18):5644-54. doi: 10.1128/AEM.01491-14. Epub 2014 Jul 7.
9
Change in land use alters the diversity and composition of Bradyrhizobium communities and led to the introduction of Rhizobium etli into the tropical rain forest of Los Tuxtlas (Mexico).土地利用的变化改变了慢生根瘤菌群落的多样性和组成，并导致里氏木霉进入洛斯图克斯的热带雨林（墨西哥）。
Microb Ecol. 2012 May;63(4):822-34. doi: 10.1007/s00248-011-9974-9. Epub 2011 Nov 23.
10
Genome sequence of Rhizobium etli CNPAF512, a nitrogen-fixing symbiont isolated from bean root nodules in Brazil.巴西菜豆根瘤中分离得到的固氮共生菌 Rhizobium etli CNPAF512 的基因组序列。
J Bacteriol. 2011 Jun;193(12):3158-9. doi: 10.1128/JB.00310-11. Epub 2011 Apr 22.
本文引用的文献
1
Variation of clonal, mesquite-associated rhizobial and bradyrhizobial populations from surface and deep soils by symbiotic gene region restriction fragment length polymorphism and plasmid profile analysis.通过共生基因区域限制性片段长度多态性和质粒图谱分析，研究了来自表层和深层土壤的克隆、牧豆树相关根瘤菌和慢生根瘤菌种群的变化。
Appl Environ Microbiol. 1994 Apr;60(4):1146-53. doi: 10.1128/aem.60.4.1146-1153.1994.
2
Nodulation and Nitrogen Fixation Efficacy of Rhizobium fredii with Phaseolus vulgaris Genotypes.根瘤菌弗雷德里希与菜豆基因型的结瘤和固氮效率。
Appl Environ Microbiol. 1988 Aug;54(8):1907-10. doi: 10.1128/aem.54.8.1907-1910.1988.
3
Nodulation of Pole Bean (Phaseolus vulgaris L.) by Rhizobium Species of Two Cross-Inoculation Groups.两交叉接种群根瘤菌对菜豆（Phaseolus vulgaris L.）结瘤的影响。
Appl Environ Microbiol. 1982 Oct;44(4):965-71. doi: 10.1128/aem.44.4.965-971.1982.
4
Nodule bacteria associated with the indigenous leguminosae of South-Western Australia.与澳大利亚西南部本土豆科植物相关的根瘤菌。
J Gen Microbiol. 1961 Oct;26:351-9. doi: 10.1099/00221287-26-2-351.
5
Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov.美国菜豆根瘤菌生物变种I型菌株重新分类为埃氏根瘤菌新种
Int J Syst Bacteriol. 1993 Apr;43(2):374-7. doi: 10.1099/00207713-43-2-374.
6
Phylogenetic analysis of rhizobia and agrobacteria based on 16S rRNA gene sequences.基于16S rRNA基因序列的根瘤菌和土壤杆菌系统发育分析。
Int J Syst Bacteriol. 1993 Apr;43(2):305-13. doi: 10.1099/00207713-43-2-305.
7
Multiple copies of nodD in Rhizobium tropici CIAT899 and BR816.热带根瘤菌CIAT899和BR816中nodD的多个拷贝。
J Bacteriol. 1993 Jan;175(2):438-47. doi: 10.1128/jb.175.2.438-447.1993.
8
Genomic heterogeneity among French Rhizobium strains isolated from Phaseolus vulgaris L.从菜豆中分离出的法国根瘤菌菌株间的基因组异质性
Int J Syst Bacteriol. 1993 Oct;43(4):761-7. doi: 10.1099/00207713-43-4-761.
9
Proposal for rejection of Agrobacterium tumefaciens and revised descriptions for the genus Agrobacterium and for Agrobacterium radiobacter and Agrobacterium rhizogenes.关于拒绝根癌土壤杆菌的提议以及土壤杆菌属、放射土壤杆菌和发根土壤杆菌的修订描述
Int J Syst Bacteriol. 1993 Oct;43(4):694-702. doi: 10.1099/00207713-43-4-694.
10
Genetic characterization of Rhizobium sp. strain TAL1145 that nodulates tree legumes.能使木本豆科植物结瘤的根瘤菌属菌株TAL1145的遗传特征分析
Can J Microbiol. 1994 Mar;40(3):208-15. doi: 10.1139/m94-034.
Zotero 插件