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酵母第十一染色体20.7 kb区域的序列包括NUP100基因、一个可能代表核苷二磷酸激酶基因的开放阅读框(ORF)、组氨酸、缬氨酸和色氨酸的tRNA,以及另外七个与已知蛋白质相似性较弱或无显著相似性的ORF。

Sequence of a 20.7 kb region of yeast chromosome XI includes the NUP100 gene, an open reading frame (ORF) possibly representing a nucleoside diphosphate kinase gene, tRNAs for His, Val and Trp in addition to seven ORFs with weak or no significant similarity to known proteins.

作者信息

Rasmussen S W

机构信息

Department of Physiology, Carlsberg Laboratory, Copenhagen, Denmark.

出版信息

Yeast. 1994 Apr;10 Suppl A:S69-74. doi: 10.1002/yea.320100009.

Abstract

The complete DNA sequence of cosmid clone pEKG080 comprising 20,723 base pairs was determined from an ordered set of subclones. The sequence contains nine open reading frames (ORFs) longer than 100 amino acids. The deduced amino acid sequence of YKL067 exhibits significant similarity to nucleoside diphosphate kinases from a number of species and probably represents this gene in yeast. YKL068 is identical to the NUP100 gene recently cloned and sequenced. The gene codes for a nuclear pore complex protein. YKL073 is identical to Hsp70 proteins from yeast and Hydra at about 20% of the amino acids. The significance of this similarity is uncertain. The remaining six ORFs do not share homology with known proteins. Three tRNAs for histidine, valine and tryptophan respectively were identified, the latter interrupted by a 34 bp intron. Solo delta sequences were found at three locations.

摘要

包含20,723个碱基对的黏粒克隆pEKG080的完整DNA序列是从一组有序的亚克隆中确定的。该序列包含九个长度超过100个氨基酸的开放阅读框(ORF)。YKL067推导的氨基酸序列与许多物种的核苷二磷酸激酶具有显著相似性,可能代表酵母中的该基因。YKL068与最近克隆和测序的NUP100基因相同。该基因编码一种核孔复合体蛋白。YKL073在约20%的氨基酸上与酵母和水螅的Hsp70蛋白相同。这种相似性的意义尚不确定。其余六个开放阅读框与已知蛋白质没有同源性。分别鉴定出了组氨酸、缬氨酸和色氨酸的三个tRNA,后者被一个34 bp的内含子中断。在三个位置发现了单独的δ序列。

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