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果蝇中DNA的进化速率取决于表达的功能和发育阶段。

Rates of DNA evolution in Drosophila depend on function and developmental stage of expression.

作者信息

Powell J R, Caccone A, Gleason J M, Nigro L

机构信息

Department of Biology, Yale University, New Haven, Connecticut 06511.

出版信息

Genetics. 1993 Feb;133(2):291-8. doi: 10.1093/genetics/133.2.291.

Abstract

DNA-sequence divergence of genes expressed in the embryonic stage was compared with the divergence of genes expressed in adults for 13 species of Drosophila representing various degrees of relatedness. DNA-DNA hybridization experiments were conducted using as tracers complementary DNA (cDNA) reversed transcribed from poly(A)+ mRNA isolated from different developmental stages. The results indicate: (1) cDNA is less diverged than total single-copy DNA; (2) cDNA sequences are not in the rapidly evolving fraction of the single-copy genome of Drosophila; (3) early in evolutionary divergence embryonic messages are about half as diverged as adult messages; sequence data from some of the species compared indicate this is likely due to differences in rates of silent substitutions in genes expressed at different stages of development; and (4) at greater evolutionary distance, the differences in embryonic and adult messages disappear; this could be due to lineage-specific shifts in codon usage.

摘要

针对代表不同亲缘关系程度的13种果蝇,比较了胚胎期表达基因的DNA序列差异与成虫期表达基因的差异。使用从不同发育阶段分离的聚腺苷酸加尾mRNA反转录得到的互补DNA(cDNA)作为示踪剂进行DNA-DNA杂交实验。结果表明:(1)cDNA的差异程度小于总单拷贝DNA;(2)cDNA序列不在果蝇单拷贝基因组快速进化的部分;(3)在进化分歧早期,胚胎期信息的差异程度约为成虫期信息的一半;所比较的一些物种的序列数据表明,这可能是由于在不同发育阶段表达的基因中沉默替换率的差异;(4)在更大的进化距离下,胚胎期和成虫期信息的差异消失;这可能是由于密码子使用的谱系特异性变化。

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本文引用的文献

6
Analysis of tRNAs during the development of Drosophila.果蝇发育过程中转运RNA的分析。
Dev Biol. 1973 Jul;33(1):185-95. doi: 10.1016/0012-1606(73)90173-5.
10
Intraspecific DNA divergence in Drosophila: a study on parthenogenetic D. mercatorum.
Mol Biol Evol. 1987 Jul;4(4):343-50. doi: 10.1093/oxfordjournals.molbev.a040451.

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