Levin M E, Hendrix R W, Casjens S R
Department of Biological Sciences, University of Pittsburgh, PA 15260.
J Mol Biol. 1993 Nov 5;234(1):124-39. doi: 10.1006/jmbi.1993.1568.
Two proteins, one of 31 kDa and one of 16 kDa, are encoded by a segment of the phage lambda tail gene region that contains two overlapping reading frames, neither of which is long enough to encode the larger protein. We show that the abundant 16-kDa protein (gpG) is encoded by the upstream open reading frame, gene G. The 31-kDa protein, gpG-T, is encoded jointly by gene G and the overlapping downstream T open reading frame. gpG-T is synthesized as the result of a translational frameshift that occurs when a ribosome translating the G gene slips back by one nucleotide at a position six codons from the C terminus of the gene and thereby bypasses the G termination codon to continue on in the T open reading frame. The resulting protein shares 135 residues of N-terminal amino acid sequence with gpG, followed by 144 amino acid residues of unique sequence. The frameshift event occurs with a frequency of approximately 4% at the sequence G GGA AAG, which encodes the dipeptide -Gly-Lys- in both the zero and -1 reading frames. The frameshift frequencies of point mutants in this "slippery sequence" argue that codon-anticodon interactions with both the glycyl and the lysyl-tRNA are important for frameshifting to occur. We find no clear evidence for a pausing mechanism to enhance frameshifting, as is seen in other well-characterized frameshifts. No simple secondary structure has been predicted for the region downstream from the slippery sequence, but this downstream sequence does contribute to the frameshifting rate. Our results together with those of Katsura and Kühl show that the frameshift product, gpG-T, has an essential role in lambda tail assembly, acting prior to tail shaft assembly. The role of gpG in tail assembly is not known. We find that both gpG and the gpG-T are absent from mature virions.
两种蛋白质,一种为31 kDa,另一种为16 kDa,由噬菌体λ尾部基因区域的一段序列编码,该区域包含两个重叠的阅读框,其中任何一个阅读框的长度都不足以编码较大的蛋白质。我们发现,含量丰富的16 kDa蛋白质(gpG)由上游开放阅读框基因G编码。31 kDa蛋白质gpG-T由基因G和重叠的下游T开放阅读框共同编码。gpG-T是核糖体在翻译G基因时,在距离该基因C末端六个密码子的位置向后滑移一个核苷酸,从而绕过G终止密码子并继续进入T开放阅读框时发生的翻译移码的结果。所得蛋白质与gpG共享135个N端氨基酸序列残基,随后是144个独特序列的氨基酸残基。移码事件在序列GGAAAG处的发生频率约为4%,该序列在零阅读框和-1阅读框中均编码二肽-Gly-Lys-。该“滑序列”中点突变体的移码频率表明,甘氨酰和赖氨酰-tRNA的密码子-反密码子相互作用对于移码的发生很重要。我们没有发现像其他特征明确的移码那样存在增强移码的暂停机制的明确证据。滑序列下游区域没有预测到简单的二级结构,但该下游序列确实对移码率有影响。我们的结果与Katsura和Kühl的结果共同表明,移码产物gpG-T在λ尾部组装中起关键作用,在尾轴组装之前发挥作用。gpG在尾部组装中的作用尚不清楚。我们发现成熟病毒粒子中不存在gpG和gpG-T。