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支持性PCR:一种扩增已知DNA片段侧翼序列的有效方法。

Supported PCR: an efficient procedure to amplify sequences flanking a known DNA segment.

作者信息

Rudenko G N, Rommens C M, Nijkamp H J, Hille J

机构信息

Free University, Department of Genetics, Amsterdam, Netherlands.

出版信息

Plant Mol Biol. 1993 Feb;21(4):723-8. doi: 10.1007/BF00014557.

DOI:10.1007/BF00014557
PMID:8448372
Abstract

We describe a novel modification of the polymerase chain reaction for efficient in vitro amplification of genomic DNA sequences flanking short stretches of known sequence. The technique utilizes a target enrichment step, based on the selective isolation of biotinylated fragments from the bulk of genomic DNA on streptavidin-containing support. Subsequently, following ligation with a second universal linker primer, the selected fragments can be amplified to amounts suitable for further molecular studies. The procedure has been applied to recover T-DNA flanking sequences in transgenic tomato plants which could subsequently be used to assign the positions of T-DNA to the molecular map of tomato. The method called supported PCR (sPCR) is a simple and efficient alternative to techniques used in the isolation of specific sequences flanking a known DNA segment.

摘要

我们描述了一种聚合酶链反应的新改良方法,用于高效体外扩增已知序列短片段侧翼的基因组DNA序列。该技术利用了一个靶标富集步骤,此步骤基于从含链霉亲和素的载体上的大量基因组DNA中选择性分离生物素化片段。随后,在用第二个通用接头引物连接后,所选片段可被扩增至适合进一步分子研究的量。该程序已应用于回收转基因番茄植株中的T-DNA侧翼序列,这些序列随后可用于将T-DNA的位置定位到番茄的分子图谱上。这种称为支持PCR(sPCR)的方法是分离已知DNA片段侧翼特定序列所使用技术的一种简单而有效的替代方法。

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Supported PCR: an efficient procedure to amplify sequences flanking a known DNA segment.支持性PCR:一种扩增已知DNA片段侧翼序列的有效方法。
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本文引用的文献

1
Structure and transcription of the nopaline synthase gene region of T-DNA.根癌农杆菌Ti质粒T-DNA的胭脂碱合成酶基因区域的结构与转录
Nucleic Acids Res. 1983 Jan 25;11(2):369-85. doi: 10.1093/nar/11.2.369.
2
A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences.一种用于体外扩增位于已知序列边界之外的DNA片段的方法。
Nucleic Acids Res. 1988 Aug 25;16(16):8186. doi: 10.1093/nar/16.16.8186.
3
Genetic applications of an inverse polymerase chain reaction.反向聚合酶链反应的遗传学应用
异染色质Y染色体上动力蛋白基因DhDhc7(Y)中的超大内含子,导致海德氏果蝇初级精母细胞中出现巨大的线环。
Genetics. 2000 Feb;154(2):759-69. doi: 10.1093/genetics/154.2.759.
4
The Y chromosomal fertility factor Threads in Drosophila hydei harbors a functional gene encoding an axonemal dynein beta heavy chain protein.海德氏果蝇中的Y染色体生育因子Threads含有一个编码轴丝动力蛋白β重链蛋白的功能基因。
Genetics. 1998 Jul;149(3):1363-76. doi: 10.1093/genetics/149.3.1363.
5
Ds read-out transcription in transgenic tomato plants.转基因番茄植株中的Ds读出转录
Mol Gen Genet. 1994 May 25;243(4):426-33. doi: 10.1007/BF00280473.
Genetics. 1988 Nov;120(3):621-3. doi: 10.1093/genetics/120.3.621.
4
In vivo footprinting of a muscle specific enhancer by ligation mediated PCR.通过连接介导的聚合酶链反应对肌肉特异性增强子进行体内足迹分析。
Science. 1989 Nov 10;246(4931):780-6. doi: 10.1126/science.2814500.
5
Genome walking by single-specific-primer polymerase chain reaction: SSP-PCR.单特异性引物聚合酶链反应基因组步移:SSP-PCR
Gene. 1989 Dec 7;84(1):1-8. doi: 10.1016/0378-1119(89)90132-7.
6
Genomic walking and sequencing by oligo-cassette mediated polymerase chain reaction.基于寡核苷酸盒介导的聚合酶链反应的基因组步移与测序
Nucleic Acids Res. 1990 May 25;18(10):3095-6. doi: 10.1093/nar/18.10.3095.
7
Polymerase chain reaction (PCR) amplification with a single specific primer.使用单一特异性引物的聚合酶链反应(PCR)扩增。
Biochem Biophys Res Commun. 1990 Mar 16;167(2):504-6. doi: 10.1016/0006-291x(90)92052-2.
8
Targeted gene walking polymerase chain reaction.靶向基因步移聚合酶链反应
Nucleic Acids Res. 1991 Jun 11;19(11):3055-60. doi: 10.1093/nar/19.11.3055.
9
PCR walking from microdissection clone M54 identifies three exons from the human gene for the neural cell adhesion molecule L1 (CAM-L1).从显微切割克隆M54进行的聚合酶链反应步移鉴定出了人类神经细胞黏附分子L1(CAM-L1)基因的三个外显子。
Nucleic Acids Res. 1991 Oct 11;19(19):5395-401. doi: 10.1093/nar/19.19.5395.
10
Characterization of the Ac/Ds behaviour in transgenic tomato plants using plasmid rescue.利用质粒拯救技术对转基因番茄植株中Ac/Ds行为的表征
Plant Mol Biol. 1992 Oct;20(1):61-70. doi: 10.1007/BF00029149.