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1.8 白地霉脂肪酶的精细结构

1.8 A refined structure of the lipase from Geotrichum candidum.

作者信息

Schrag J D, Cygler M

机构信息

Biotechnology Research Institute, National Research Council of Canada, Montréal, Québec.

出版信息

J Mol Biol. 1993 Mar 20;230(2):575-91. doi: 10.1006/jmbi.1993.1171.

Abstract

A lipase from the fungus Geotrichum candidum is one of only three interfacially activated lipases whose structures have been reported to date. We have previously reported the partially refined 2.2 A structure of this enzyme. We have subsequently extended the resolution and here report the fully refined 1.8 A structure of this lipase. The structure observed in the crystal is apparently not the lipolytic conformation, as the active site is not accessible from the surface of the molecule. A single large cavity is found in the interior of the molecule and extends from the catalytic Ser to two surface helices, suggesting that this face may be the region that interacts with the lipid interface. The mobility of local segments on this face is indicated by temperature factors larger than elsewhere in the molecule and by the observation of several residues whose side-chains are discretely disordered. These observations strongly suggest that this portion of the molecule is involved in interfacial and substrate binding, but the exact nature of the conformational changes induced by binding to the lipid interface can not be determined.

摘要

来自白地霉的一种脂肪酶是迄今为止仅有的三种已报道结构的界面活化脂肪酶之一。我们之前报道过该酶2.2埃的部分精修结构。随后我们提高了分辨率,在此报道该脂肪酶1.8埃的完全精修结构。晶体中观察到的结构显然不是脂解构象,因为活性位点无法从分子表面接近。在分子内部发现了一个大腔,它从催化丝氨酸延伸到两个表面螺旋,这表明该面可能是与脂质界面相互作用的区域。该面上局部片段的流动性通过比分子其他部位更大的温度因子以及几个侧链离散无序的残基的观察得以体现。这些观察结果强烈表明分子的这一部分参与了界面和底物结合,但与脂质界面结合所诱导的构象变化的确切性质尚无法确定。

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