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鲷科(硬骨鱼纲,鲈形目)的埃可RI着丝粒卫星DNA包含一种其他脊椎动物着丝粒卫星DNA共有的序列基序。

The EcoRI centromeric satellite DNA of the Sparidae family (Pisces, Perciformes) contains a sequence motive common to other vertebrate centromeric satellite DNAs.

作者信息

Garrido-Ramos M A, Jamilena M, Lozano R, Ruiz Rejón C, Ruiz Rejón M

机构信息

Departamento de Genética, Facultad de Ciencias, Universidad de Granada, Spain.

出版信息

Cytogenet Cell Genet. 1995;71(4):345-51. doi: 10.1159/000134137.

Abstract

By means of cloning, sequencing, and fluorescence in situ hybridization, we have determined that the EcoRI satellite DNA family is conserved in the 10 sparid species analyzed here. Its conservation, its chromosomal location at the centromere of each chromosome, and its structural features could make this satellite DNA family an important structural and/or functional element of the centromeres of these species. Monomeric units of this satellite DNA have a consensus length of 187 bp. Its sequence is characterized by a high AT content and the presence of short runs of consecutive AT base pairs. These monomeric EcoRI repeats also contain three to four copies, depending on the species, of a short sequence reflecting the repetitive duplication and subsequent divergence of an ancestral 9-bp sequence in this family. This sequence motive is conserved in some parts of the monomeric units of the different species studied at the same positions, and, precisely, surrounding the area in which the curvature of the monomeric molecule is greatest. The 9-bp sequence motive is similar to other direct-repeat sequences of the centromeric satellite DNAs of other vertebrates, including those of amphibians and mammals.

摘要

通过克隆、测序和荧光原位杂交技术,我们确定了EcoRI卫星DNA家族在本文分析的10种鲷科鱼类中是保守的。其保守性、在每条染色体着丝粒处的染色体定位以及结构特征,可能使这个卫星DNA家族成为这些物种着丝粒的重要结构和/或功能元件。这种卫星DNA的单体单元共有长度为187 bp。其序列的特点是AT含量高,且存在连续的短AT碱基对。这些EcoRI重复单体还包含三到四个拷贝(取决于物种)的短序列,反映了该家族中一个祖先9 bp序列的重复复制和随后的分化。这个序列基序在不同物种单体单元的某些部分在相同位置是保守的,确切地说,是在单体分子曲率最大的区域周围。这个9 bp序列基序与其他脊椎动物着丝粒卫星DNA的其他直接重复序列相似,包括两栖动物和哺乳动物的那些序列。

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