• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

脱氮副球菌这一甲基营养型细菌聚(3-羟基链烷酸酯)合酶基因的分子分析

Molecular analysis of the poly(3-hydroxyalkanoate) synthase gene from a methylotrophic bacterium, Paracoccus denitrificans.

作者信息

Ueda S, Yabutani T, Maehara A, Yamane T

机构信息

Department of Bioproductive Sciences, Faculty of Agriculture, Utsunomiya University, Japan.

出版信息

J Bacteriol. 1996 Feb;178(3):774-9. doi: 10.1128/jb.178.3.774-779.1996.

DOI:10.1128/jb.178.3.774-779.1996
PMID:8550512
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC177724/
Abstract

A 3.6-kb EcoRI-SalI fragment of Paracoccus denitrificans DNA hybridized with a DNA probe carrying the poly(3-hydroxyalkanoate) (PHA) synthase gene (phaC) of Alcaligenes eutrophus. Nucleotide sequence analysis of this region showed the presence of a 1,872-bp open reading frame (ORF), which corresponded to a polypeptide with a molecular weight of 69,537. Upstream of the ORF, a promoter-like sequence was found. Escherichia coli carrying the fusion gene between lacZ and the ORF accumulated a level of poly(3-hydroxybutyrate) that was as much as 20 wt% of the cell dry weight in the presence of beta-ketothiolase and acetoacetylcoenzyme A reductase genes of A. eutrophus. The ORF was designated phaCPd. A plasmid vector carrying the phaCPd'-'lacZ fusion gene downstream of the promoter-like sequence expressed beta-galactosidase activity in P. denitrificans. When a multicopy and broad-host-range vector carrying the ORF along with the promoter-like sequence was introduced into P. denitrificans, the PHA content in the cells increased by twofold compared with cells carrying only a vector sequence.

摘要

反硝化副球菌DNA的一个3.6千碱基对的EcoRI-SalI片段与携带嗜碱产碱菌聚(3-羟基链烷酸酯)(PHA)合酶基因(phaC)的DNA探针杂交。该区域的核苷酸序列分析显示存在一个1872碱基对的开放阅读框(ORF),它对应于一个分子量为69537的多肽。在ORF的上游,发现了一个类似启动子的序列。携带lacZ与ORF之间融合基因的大肠杆菌在存在嗜碱产碱菌的β-酮硫解酶和乙酰乙酰辅酶A还原酶基因的情况下,积累的聚(3-羟基丁酸酯)水平高达细胞干重的20%(重量)。该ORF被命名为phaCPd。一个携带phaCPd'-'lacZ融合基因且位于类似启动子序列下游的质粒载体在反硝化副球菌中表达β-半乳糖苷酶活性。当一个携带ORF以及类似启动子序列的多拷贝和广宿主范围载体被导入反硝化副球菌时,与仅携带载体序列的细胞相比,细胞中的PHA含量增加了两倍。

相似文献

1
Molecular analysis of the poly(3-hydroxyalkanoate) synthase gene from a methylotrophic bacterium, Paracoccus denitrificans.脱氮副球菌这一甲基营养型细菌聚(3-羟基链烷酸酯)合酶基因的分子分析
J Bacteriol. 1996 Feb;178(3):774-9. doi: 10.1128/jb.178.3.774-779.1996.
2
Cloning and nucleotide sequences of genes relevant for biosynthesis of poly(3-hydroxybutyric acid) in Chromatium vinosum strain D.嗜硫红假单胞菌D菌株中与聚(3-羟基丁酸)生物合成相关基因的克隆及核苷酸序列
Eur J Biochem. 1992 Oct 1;209(1):135-50. doi: 10.1111/j.1432-1033.1992.tb17270.x.
3
Analysis of beta-ketothiolase and acetoacetyl-CoA reductase genes of a methylotrophic bacterium, Paracoccus denitrificans, and their expression in Escherichia coli.脱氮副球菌这一甲基营养型细菌的β-酮硫解酶和乙酰乙酰辅酶A还原酶基因分析及其在大肠杆菌中的表达
FEMS Microbiol Lett. 1995 Nov 1;133(1-2):85-90. doi: 10.1111/j.1574-6968.1995.tb07865.x.
4
Identification of the intracellular polyhydroxyalkanoate depolymerase gene of Paracoccus denitrificans and some properties of the gene product.反硝化副球菌细胞内聚羟基脂肪酸酯解聚酶基因的鉴定及该基因产物的一些特性
FEMS Microbiol Lett. 2001 Mar 15;196(2):159-64. doi: 10.1111/j.1574-6968.2001.tb10558.x.
5
Molecular cloning, sequencing and expression in Escherichia coli of the poly(3-hydroxyalkanoate) synthesis genes from Alcaligenes latus DSM1124.从产碱杆菌DSM1124中克隆聚(3-羟基链烷酸酯)合成基因、测序并在大肠杆菌中表达
J Biotechnol. 1998 Oct 8;64(2-3):125-35. doi: 10.1016/s0168-1656(98)00093-5.
6
Sequence and expression of the gene encoding the respiratory nitrous-oxide reductase from Paracoccus denitrificans. New and conserved structural and regulatory motifs.反硝化副球菌呼吸性一氧化二氮还原酶编码基因的序列与表达。新的保守结构和调控基序。
Eur J Biochem. 1993 Nov 15;218(1):49-57. doi: 10.1111/j.1432-1033.1993.tb18350.x.
7
Cloning and analysis of the poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) biosynthesis genes of Aeromonas caviae.豚鼠气单胞菌聚(3-羟基丁酸酯-co-3-羟基己酸酯)生物合成基因的克隆与分析
J Bacteriol. 1997 Aug;179(15):4821-30. doi: 10.1128/jb.179.15.4821-4830.1997.
8
Gene dosage effects on polyhydroxyalkanoates synthesis from n-alcohols in Paracoccus denitrificans.基因剂量对反硝化副球菌中由正醇合成聚羟基脂肪酸酯的影响。
Biotechnol Bioeng. 1998 Oct 5;60(1):61-9.
9
Molecular analysis of the Alcaligenes eutrophus poly(3-hydroxybutyrate) biosynthetic operon: identification of the N terminus of poly(3-hydroxybutyrate) synthase and identification of the promoter.真养产碱菌聚(3-羟基丁酸酯)生物合成操纵子的分子分析:聚(3-羟基丁酸酯)合酶N端的鉴定及启动子的鉴定
J Bacteriol. 1991 Jan;173(1):168-75. doi: 10.1128/jb.173.1.168-175.1991.
10
The genetic organization of the mau gene cluster of the facultative autotroph Paracoccus denitrificans.兼性自养反硝化副球菌mau基因簇的遗传组织
Biochem Biophys Res Commun. 1992 May 15;184(3):1181-9. doi: 10.1016/s0006-291x(05)80007-5.

引用本文的文献

1
Microplastics a Novel Substratum for Polyhydroxyalkanoate (PHA)-Producing Bacteria in Aquatic Environments.微塑料是水生环境中聚羟基烷酸酯(PHA)产生菌的新型基质。
Curr Microbiol. 2022 Jul 19;79(9):258. doi: 10.1007/s00284-022-02929-y.
2
The optimal combination of Nile red identification, colony polymerase chain reaction, and gas chromatography detection methods in screening for polyhydroxyalkanoicate-producing bacteria.尼罗红鉴定、菌落聚合酶链反应和气相色谱检测方法相结合筛选聚羟基烷酸酯产生菌。
Arch Microbiol. 2022 May 10;204(6):312. doi: 10.1007/s00203-022-02868-z.
3
PHA Production and PHA Synthases of the Halophilic Bacterium sp. SF2003.嗜盐细菌SF2003的聚羟基脂肪酸酯(PHA)合成及PHA合酶
Bioengineering (Basel). 2020 Mar 20;7(1):29. doi: 10.3390/bioengineering7010029.
4
3-Hydroxybutyrate oligomer hydrolase and 3-hydroxybutyrate dehydrogenase participate in intracellular polyhydroxybutyrate and polyhydroxyvalerate degradation in Paracoccus denitrificans.3-羟基丁酸寡聚物水解酶和 3-羟基丁酸脱氢酶参与脱氮副球菌细胞内聚羟基丁酸和聚羟基戊酸的降解。
Appl Environ Microbiol. 2014 Feb;80(3):986-93. doi: 10.1128/AEM.03396-13. Epub 2013 Nov 22.
5
Screening and isolation of PHB-producing bacteria in a polluted marine microbial mat.受污染海洋微生物席中聚羟基丁酸酯产生菌的筛选与分离
Microb Ecol. 2008 Jul;56(1):112-20. doi: 10.1007/s00248-007-9329-8. Epub 2007 Oct 30.
6
Autoregulator protein PhaR for biosynthesis of polyhydroxybutyrate [P(3HB)] possibly has two separate domains that bind to the target DNA and P(3HB): Functional mapping of amino acid residues responsible for DNA binding.用于聚羟基丁酸酯[P(3HB)]生物合成的自调节蛋白PhaR可能有两个与靶DNA和P(3HB)结合的独立结构域:负责DNA结合的氨基酸残基的功能图谱分析。
J Bacteriol. 2007 Feb;189(3):1118-27. doi: 10.1128/JB.01550-06. Epub 2006 Nov 22.
7
A repressor protein, PhaR, regulates polyhydroxyalkanoate (PHA) synthesis via its direct interaction with PHA.一种阻遏蛋白,即PhaR,通过其与聚羟基链烷酸酯(PHA)的直接相互作用来调节聚羟基链烷酸酯(PHA)的合成。
J Bacteriol. 2002 Jul;184(14):3992-4002. doi: 10.1128/JB.184.14.3992-4002.2002.
8
Analyses of a polyhydroxyalkanoic acid granule-associated 16-kilodalton protein and its putative regulator in the pha locus of Paracoccus denitrificans.反硝化副球菌聚羟基脂肪酸颗粒相关16千道尔顿蛋白及其在pha基因座中假定调节因子的分析。
J Bacteriol. 1999 May;181(9):2914-21. doi: 10.1128/JB.181.9.2914-2921.1999.
9
Metabolic engineering of poly(3-hydroxyalkanoates): from DNA to plastic.聚(3-羟基链烷酸酯)的代谢工程:从DNA到塑料
Microbiol Mol Biol Rev. 1999 Mar;63(1):21-53. doi: 10.1128/MMBR.63.1.21-53.1999.
10
Molecular genetics of the genus Paracoccus: metabolically versatile bacteria with bioenergetic flexibility.副球菌属的分子遗传学:具有生物能量灵活性的代谢多功能细菌。
Microbiol Mol Biol Rev. 1998 Dec;62(4):1046-78. doi: 10.1128/MMBR.62.4.1046-1078.1998.

本文引用的文献

1
Synthesis of Poly(3-Hydroxybutyrate-Co-3-Hydroxyvalerate) from Methanol and n-Amyl Alcohol by the Methylotrophic Bacteria Paracoccus denitrificans and Methylobacterium extorquens.甲醇和正戊醇通过甲基营养菌脱氮副球菌和甲基杆菌合成聚(3-羟基丁酸-co-3-羟基戊酸)。
Appl Environ Microbiol. 1992 Nov;58(11):3574-9. doi: 10.1128/aem.58.11.3574-3579.1992.
2
Protein measurement with the Folin phenol reagent.使用福林酚试剂进行蛋白质测定。
J Biol Chem. 1951 Nov;193(1):265-75.
3
Genetics of Paracoccus denitrificans.反硝化副球菌的遗传学
FEMS Microbiol Rev. 1993 Jan;10(1-2):83-117. doi: 10.1016/0378-1097(93)90505-v.
4
pBBR1MCS: a broad-host-range cloning vector.pBBR1MCS:一种广宿主范围的克隆载体。
Biotechniques. 1994 May;16(5):800-2.
5
Cloning and analysis of the polyhydroxyalkanoic acid synthase gene from an Acinetobacter sp.: evidence that the gene is both plasmid and chromosomally located.不动杆菌属一种细菌的聚羟基脂肪酸合酶基因的克隆与分析:该基因定位于质粒和染色体的证据
FEMS Microbiol Lett. 1994 May 1;118(1-2):145-52. doi: 10.1111/j.1574-6968.1994.tb06817.x.
6
Cloning and characterization of the Methylobacterium extorquens polyhydroxyalkanoic-acid-synthase structural gene.甲基营养型芽孢杆菌聚羟基脂肪酸合酶结构基因的克隆与鉴定
Appl Microbiol Biotechnol. 1993 Jun;39(3):309-17. doi: 10.1007/BF00192084.
7
Cloning and molecular analysis of the poly(3-hydroxybutyric acid) biosynthetic genes of Thiocystis violacea.紫硫囊菌聚(3-羟基丁酸)生物合成基因的克隆与分子分析
Appl Microbiol Biotechnol. 1993 Jan;38(4):493-501. doi: 10.1007/BF00242944.
8
Compilation and analysis of Escherichia coli promoter DNA sequences.大肠杆菌启动子DNA序列的汇编与分析
Nucleic Acids Res. 1983 Apr 25;11(8):2237-55. doi: 10.1093/nar/11.8.2237.
9
"Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A.“蛋白质免疫印迹法”:蛋白质从十二烷基硫酸钠 - 聚丙烯酰胺凝胶电泳转移至未修饰的硝酸纤维素膜上,并用抗体和放射性碘化蛋白A进行放射自显影检测。
Anal Biochem. 1981 Apr;112(2):195-203. doi: 10.1016/0003-2697(81)90281-5.
10
Cleavage of structural proteins during the assembly of the head of bacteriophage T4.在噬菌体T4头部组装过程中结构蛋白的切割
Nature. 1970 Aug 15;227(5259):680-5. doi: 10.1038/227680a0.