Ermler U, Siddiqui R A, Cramm R, Friedrich B
Max-Planck-Institut fur Biophysik, Frankfurt, Germany.
EMBO J. 1995 Dec 15;14(24):6067-77. doi: 10.1002/j.1460-2075.1995.tb00297.x.
The molecular structure of the flavohemoglobin from Alcaligenes eutrophus has been determined to a resolution of 1.75 A and refined to an R-factor of 19.6%. The protein comprises two fused modules: a heme binding module, which belongs to the globin family, and an FAD binding oxidoreductase module, which adopts a fold like ferredoxin reductase. The most striking deviation of the bacterial globin structure from those of other species is the movement of helix E in a way to provide more space in the vicinity of the distal heme binding site. A comparison with other members of the ferredoxin reductase family shows similar tertiary structures for the individual FAD and NAD binding domains but largely different interdomain orientations. The heme and FAD molecules approach each other to a minimal distance of 6.3 A and adopt an interplanar angle of 80 degrees. The electron transfer from FAD to heme occurs in a predominantly polar environment and may occur directly or be mediated by a water molecule.
嗜碱假单胞菌黄素血红蛋白的分子结构已确定至1.75埃的分辨率,并精修至19.6%的R因子。该蛋白质由两个融合模块组成:一个属于球蛋白家族的血红素结合模块,以及一个采用类似铁氧还蛋白还原酶折叠的FAD结合氧化还原酶模块。细菌球蛋白结构与其他物种的最显著差异是螺旋E的移动,其移动方式是在远端血红素结合位点附近提供更多空间。与铁氧还蛋白还原酶家族的其他成员比较显示,各个FAD和NAD结合结构域具有相似的三级结构,但结构域间的取向差异很大。血红素和FAD分子彼此靠近至最小距离6.3埃,并采用80度的平面间夹角。从FAD到血红素的电子转移主要发生在极性环境中,可能直接发生或由水分子介导。