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用于晶体学和核磁共振的RNA的高效液相色谱纯化

HPLC purification of RNA for crystallography and NMR.

作者信息

Anderson A C, Scaringe S A, Earp B E, Frederick C A

机构信息

Committee on Biophysics at Harvard University, and Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.

出版信息

RNA. 1996 Feb;2(2):110-7.

PMID:8601278
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1369356/
Abstract

Homogeneous preparations of milligram quantities of RNA are a prerequisite for their characterization by biophysical methods such as crystallography or NMR spectroscopy. Methods for obtaining milligram quantities of pure synthetic RNA are described in this paper. These methods employ anion exchange HPLC for purifying full-length sequence from failure sequences and incompletely deprotected material. RNA molecules with little or extensive amounts of secondary structure could be purified. In cases where the RNA molecule was tightly folded, the cation in the eluent buffer influenced both the distinction of the peaks during chromatography and the final folded conformation. Finally, two RNA sequences were chemically synthesized, deprotected, purified, and crystallized using this methodology.

摘要

毫克量RNA的均一制剂是通过诸如晶体学或核磁共振光谱等生物物理方法对其进行表征的前提条件。本文描述了获得毫克量纯合成RNA的方法。这些方法采用阴离子交换高效液相色谱从失败序列和未完全脱保护的材料中纯化全长序列。几乎没有二级结构或具有大量二级结构的RNA分子都可以被纯化。在RNA分子紧密折叠的情况下,洗脱缓冲液中的阳离子会影响色谱过程中峰的区分以及最终的折叠构象。最后,使用该方法化学合成、脱保护、纯化并结晶了两个RNA序列。

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本文引用的文献

1
An RNA motif that binds ATP.一种能结合ATP的RNA基序。
Nature. 1993 Aug 5;364(6437):550-3. doi: 10.1038/364550a0.
2
Five pseudoknots are present at the 204 nucleotides long 3' noncoding region of tobacco mosaic virus RNA.在烟草花叶病毒RNA 204个核苷酸长的3'非编码区存在5个假结。
Nucleic Acids Res. 1985 Nov 11;13(21):7673-86. doi: 10.1093/nar/13.21.7673.
3
Absorbance melting curves of RNA.RNA的吸光度熔解曲线。
Methods Enzymol. 1989;180:304-25. doi: 10.1016/0076-6879(89)80108-9.
4
Solid-phase synthesis and high-resolution NMR studies of two synthetic double-helical RNA dodecamers: r(CGCGAAUUCGCG) and r(CGCGUAUACGCG).两种合成双螺旋RNA十二聚体r(CGCGAAUUCGCG)和r(CGCGUAUACGCG)的固相合成及高分辨率核磁共振研究
Biochemistry. 1989 Mar 21;28(6):2422-35. doi: 10.1021/bi00432a013.
5
A small catalytic oligoribonucleotide.一种小型催化性寡核糖核苷酸。
Nature. 1987;328(6131):596-600. doi: 10.1038/328596a0.
6
Chemical synthesis of biologically active oligoribonucleotides using beta-cyanoethyl protected ribonucleoside phosphoramidites.使用β-氰基乙基保护的核糖核苷亚磷酰胺进行生物活性寡核糖核苷酸的化学合成。
Nucleic Acids Res. 1990 Sep 25;18(18):5433-41. doi: 10.1093/nar/18.18.5433.
7
Exploiting the chemical synthesis of RNA.
Trends Biochem Sci. 1992 Sep;17(9):334-9. doi: 10.1016/0968-0004(92)90306-t.
8
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Nucleic Acids Res. 1992 Oct 11;20(19):5131-6. doi: 10.1093/nar/20.19.5131.