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核糖体分型在志贺氏菌病分子流行病学研究中的应用价值

Usefulness of ribotyping in a molecular epidemiology study of shigellosis.

作者信息

Mendoza M C, Martín M C, González-Hevia M A

机构信息

Departamento de Biología Funcional, Universidad de Oviedo, Spain.

出版信息

Epidemiol Infect. 1996 Apr;116(2):127-35. doi: 10.1017/s0950268800052353.

DOI:10.1017/s0950268800052353
PMID:8620903
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2271626/
Abstract

Ribotyping performed with six restriction endonucleases was used to study the molecular epidemiology of shigellosis in Asturias, Spain. The series included Shigella sonnei from 34 sporadic cases, 3 outbreaks and 3 reference strains, and S. Flexneri from sporadic cases and 1 reference strain. The S. sonnei strains were grouped into 5 ribotypes with Sal I, 4 with Hind III and Pvu II, 3 with Bgl II and EcoR I and 2 with Hinc II (Discriminatory Index (DI) between 0.54 and 0.14); the S. flexneri into 5 ribotypes with Sal I, Hinc II and Hind III, and 4 with the other enzymes (DI = 0.71 - 0.63). The combination of results for 2 or more enzymes facilitated and additional discrimination, the highest values in S. sonnei were for the 6 enzymes (16 types, DI = 0.91) and in S. flexneri for some combinations of 3 or more enzymes (7 types, DI = 0.81). Ribotypes with the 6 enzymes defined 16 clonal lines in S. sonnei and 7 in S. flexneri, which showed a different degree of genetic heterogeneity, and all the lines of each species falling into a different cluster. No line appeared as clearly endemic in the bowels of Asturian people.

摘要

运用六种限制性内切酶进行核糖体分型,以研究西班牙阿斯图里亚斯地区志贺氏菌病的分子流行病学。该系列研究包括来自34例散发病例、3次暴发疫情的宋内志贺氏菌以及3株参考菌株,还有来自散发病例的福氏志贺氏菌和1株参考菌株。宋内志贺氏菌菌株用Sal I可分为5个核糖体分型,用Hind III和Pvu II可分为4个,用Bgl II和EcoR I可分为3个,用Hinc II可分为2个(鉴别指数(DI)在0.54至0.14之间);福氏志贺氏菌用Sal I、Hinc II和Hind III可分为5个核糖体分型,用其他酶可分为个4(DI = 0.71 - 0.63)。两种或更多种酶的结果组合有助于进一步鉴别,宋内志贺氏菌中6种酶的鉴别能力最强(16种类型,DI = 0.91),福氏志贺氏菌中3种或更多种酶的某些组合鉴别能力最强(7种类型,DI = 0.81)。6种酶确定的核糖体分型在宋内志贺氏菌中定义了16个克隆系,在福氏志贺氏菌中定义了7个克隆系,这些克隆系显示出不同程度的遗传异质性,且每个菌种的所有克隆系都分属于不同的簇。在阿斯图里亚斯人群肠道中没有明显的地方流行克隆系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0123/2271626/2e7b0b85c376/epidinfect00056-0032-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0123/2271626/a94cf11a096a/epidinfect00056-0030-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0123/2271626/2e7b0b85c376/epidinfect00056-0032-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0123/2271626/a94cf11a096a/epidinfect00056-0030-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0123/2271626/2e7b0b85c376/epidinfect00056-0032-a.jpg

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本文引用的文献

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Differentiation of strains from a food-borne outbreak of Salmonella enterica by phenotypic and genetic typing methods.通过表型和基因分型方法对食源性病原体肠炎沙门氏菌爆发疫情中的菌株进行鉴别。
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Characterization of endemic Shigella boydii strains isolated in Iran by serotyping, antimicrobial resistance, plasmid profile, ribotyping and pulsed-field gel electrophoresis.通过血清分型、抗菌药物耐药性、质粒图谱、核糖体分型和脉冲场凝胶电泳对伊朗分离出的地方性鲍氏志贺氏菌菌株进行特征分析。
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