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蛋白质诱导的热容变化和脂质诱导的蛋白质聚集的蒙特卡罗模拟研究。

A Monte Carlo simulation study of protein-induced heat capacity changes and lipid-induced protein clustering.

作者信息

Heimburg T, Biltonen R L

机构信息

Max-Planck-Institut für biophysikalische Chemie, Gottingen-Nikolausberg, Germany.

出版信息

Biophys J. 1996 Jan;70(1):84-96. doi: 10.1016/S0006-3495(96)79551-6.

Abstract

Monte Carlo simulations were used to describe the interaction of peripheral and integral proteins with lipids in terms of heat capacity profiles and protein distribution. The simulations were based on a two-state model for the lipid, representing the lipid state as being either gel or fluid. The interaction between neighboring lipids has been taken into account through an unlike nearest neighbor free energy term delta omega, which is a measure of the cooperativity of the lipid transition. Lipid/protein interaction was considered using the experimental observation that the transition midpoints of lipid membranes are shifted upon protein binding, a thermodynamic consequence of different binding constants of protein with fluid or gel lipids. The difference of the binding free energies was used as an additional parameter to describe lipid-protein interaction. The heat capacity profiles of lipid/protein complexes could be well described for both peripheral and integral proteins. Binding of proteins results in a shift and an asymmetric broadening of the melting profile. The model results in a coexistence of gel and fluid lipid domains in the proximity of the thermotropic transition. As a consequence, bound peripheral proteins aggregate in the temperature range of the lipid transition. Integral proteins induce calorimetric melting curves that are qualitatively different from that of peripheral proteins and aggregate in either gel or liquid crystalline lipid phase. The results presented here are in good agreement with calorimetric experiments on lipid-protein complexes and have implementations for the functional control of proteins.

摘要

蒙特卡罗模拟用于根据热容曲线和蛋白质分布来描述外周蛋白和整合蛋白与脂质的相互作用。这些模拟基于脂质的双态模型,将脂质状态表示为凝胶态或流体态。相邻脂质之间的相互作用通过一个不同最近邻自由能项Δω来考虑,它是脂质转变协同性的一种度量。利用实验观察结果来考虑脂质/蛋白质相互作用,即脂质膜的转变中点在蛋白质结合时会发生移动,这是蛋白质与流体或凝胶脂质不同结合常数的热力学结果。结合自由能的差异被用作描述脂质 - 蛋白质相互作用的另一个参数。对于外周蛋白和整合蛋白,脂质/蛋白质复合物的热容曲线都能得到很好的描述。蛋白质的结合导致熔解曲线发生移动和不对称展宽。该模型导致在热致转变附近存在凝胶态和流体态脂质域的共存。因此,结合的外周蛋白在脂质转变温度范围内聚集。整合蛋白诱导的量热熔解曲线在性质上与外周蛋白不同,并在凝胶或液晶脂质相中聚集。这里给出的结果与脂质 - 蛋白质复合物的量热实验结果非常吻合,并且对蛋白质的功能控制有应用价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8210/1224911/04cd7690eb24/biophysj00052-0088-a.jpg

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