对拟南芥三号染色体上一个81千碱基重叠群的序列分析。
Sequence analysis of an 81 kb contig from Arabidopsis thaliana chromosome III.
作者信息
Quigley F, Dao P, Cottet A, Mache R
机构信息
Laboratoire de Génétique Moléculaire des Plantes, Université JosephFourier et Centre National de la Recherche Scientifique, Grenoble, France.
出版信息
Nucleic Acids Res. 1996 Nov 1;24(21):4313-8. doi: 10.1093/nar/24.21.4313.
Abstract
The nucleotide sequence of a 81 493 bp contig from Arabidopsis thaliana chromosome III has been determined together with 11 corresponding cognate cDNAs. Analysis of the finished sequence and comparison with public databases indicates a gene density of one gene per 4527 bp and identifies 17 novel genes, 10 of which are totally unknown or have no well-defined function. In addition, the contig contains part of a non-LTR retrotransposon and large direct and inverted repeats. Contig analysis also provides information on the structure and genomic organization of plant genes.
摘要
已确定了拟南芥三号染色体上一段81493 bp重叠群的核苷酸序列以及11个相应的同源cDNA。对完成的序列进行分析并与公共数据库进行比较，结果表明基因密度为每4527 bp有一个基因，并鉴定出17个新基因，其中10个完全未知或没有明确的功能。此外，该重叠群包含一个非LTR逆转座子的一部分以及大的正向和反向重复序列。重叠群分析还提供了有关植物基因结构和基因组组织的信息。
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