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氧化亚铁硫杆菌中铜(I)锈胞蓝蛋白的核磁共振溶液结构:极端酸稳定性和氧化还原电位的结构基础

NMR solution structure of Cu(I) rusticyanin from Thiobacillus ferrooxidans: structural basis for the extreme acid stability and redox potential.

作者信息

Botuyan M V, Toy-Palmer A, Chung J, Blake R C, Beroza P, Case D A, Dyson H J

机构信息

Department of Molecular Biology, Scripps Research Institute, La Jolla, CA 92037, USA.

出版信息

J Mol Biol. 1996 Nov 15;263(5):752-67. doi: 10.1006/jmbi.1996.0613.

Abstract

The solution structure of the Cu(I) form of the rusticyanin from Thiobacillus ferrooxidans has been calculated from a total of 1979 distance and dihedral angle constraints derived from 1H, 13C and 15N NMR spectra. The structures reveal two beta-sheets, one of six strands and one of seven strands that are tightly packed in a beta-barrel or beta-sandwich arrangement, and a short helix that extends on the outside of one of the sheets to form a second hydrophobic core. The copper coordination sphere is composed of the standard type I ligands (His2CysMet) in a distorted tetrahedral arrangement. The copper-binding site is located within a hydrophobic region at one end of the molecule, surrounded by a number of aromatic rings and hydrophobic residues. This configuration probably contributes to the acid stability of the copper site, since close association of the aromatic rings with the histidine ligands would sterically hinder their dissociation from the copper. An electrostatic analysis based on a comparison of the structures of rusticyanin and French bean plastocyanin shows that factors determining the high redox potential of rusticyanin include contributions from charged side-chains and from the disposition of backbone peptide dipoles, particularly in the 81 to 86 region of the sequence and the ligand cysteine residue. These interactions should also contribute to the acid stability by inhibiting protonation of His143.

摘要

通过对来自氧化亚铁硫杆菌的铁锈蛋白铜(I)形式的1H、13C和15N NMR谱得出的总共1979个距离和二面角约束条件,计算出了其溶液结构。这些结构显示出两个β折叠片层,一个由六条链组成,另一个由七条链组成,它们以β桶或β三明治排列紧密堆积,还有一个短螺旋在其中一个片层的外侧延伸,形成第二个疏水核心。铜配位球由处于扭曲四面体排列的标准I型配体(His2CysMet)组成。铜结合位点位于分子一端的疏水区域内,被多个芳香环和疏水残基包围。这种构型可能有助于铜位点的酸稳定性,因为芳香环与组氨酸配体的紧密结合会在空间上阻碍它们与铜的解离。基于铁锈蛋白和菜豆质体蓝素结构比较的静电分析表明,决定铁锈蛋白高氧化还原电位的因素包括带电侧链和主链肽偶极的排列所起的作用,特别是在序列的81至86区域和配体半胱氨酸残基处。这些相互作用也应通过抑制His143的质子化而有助于酸稳定性。

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