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胶原蛋白三螺旋中Cα-H...O=C氢键的晶体学证据。

Crystallographic evidence for C alpha-H...O=C hydrogen bonds in a collagen triple helix.

作者信息

Bella J, Berman H M

机构信息

Department of Chemistry, Rutgers University, Piscataway, NJ 08855-0939, USA.

出版信息

J Mol Biol. 1996 Dec 13;264(4):734-42. doi: 10.1006/jmbi.1996.0673.

Abstract

The crystal structure of the collagen triple-helical peptide (Pro-Hyp-Gly)4-Pro-Hyp-Ala-(Pro-Hyp-Gly)5 shows evidence for the existence of interchain contacts between alpha-carbon hydrogens from Gly and Hyp residues, and carbonyl groups from Gly and Pro residues on neighboring chains. The geometrical disposition of these contacts makes it reasonable to describe them as C alpha-H...O=C hydrogen bonds. Two repetitive patterns can be identified, and one of them is identical to a similar type of interaction reported recently for beta-sheets in globular proteins, which suggests a more universal character for C-H...O hydrogen bonds in building protein secondary structure elements. They are presumably much weaker in energy than the interchain N-H...O=C hydrogen bonds responsible for the alignment of the three chains in the collagen triple helix, and therefore their contribution will be a small but cooperative decrease on the total interchain hydrogen bonding energy.

摘要

胶原蛋白三螺旋肽(Pro-Hyp-Gly)4-Pro-Hyp-Ala-(Pro-Hyp-Gly)5的晶体结构显示,甘氨酸(Gly)和羟脯氨酸(Hyp)残基的α-碳原子上的氢与相邻链上甘氨酸和脯氨酸(Pro)残基的羰基之间存在链间接触。这些接触的几何排列使其可以合理地描述为Cα-H...O=C氢键。可以识别出两种重复模式,其中一种与最近报道的球状蛋白质中β-折叠的类似相互作用类型相同,这表明C-H...O氢键在构建蛋白质二级结构元件方面具有更普遍的特征。它们的能量可能比负责胶原蛋白三螺旋中三条链排列的链间N-H...O=C氢键弱得多,因此它们的贡献将是总链间氢键能的少量但协同的降低。

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