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人类肿瘤和细胞系中p53基因体细胞突变数据库:最新汇编与未来展望

Database of p53 gene somatic mutations in human tumors and cell lines: updated compilation and future prospects.

作者信息

Hainaut P, Soussi T, Shomer B, Hollstein M, Greenblatt M, Hovig E, Harris C C, Montesano R

机构信息

International Agency for Research on Cancer, 150 cours Albert-Thomas, 69372 Lyon Cedex 08, France.

出版信息

Nucleic Acids Res. 1997 Jan 1;25(1):151-7. doi: 10.1093/nar/25.1.151.

Abstract

In recent years, there has been an exponential increase in the number of p53 mutations identified in human cancers. The p53 mutation database consists of a list of point mutations in thep53 gene of human tumors and cell lines, compiled from the published literature and made available through electronic media. The database is now maintained at the International Agency for Research on Cancer (IARC) and is updated twice a year. The current version contains records on 5091 published mutations and is expected to surpass the 6000 mark in the January 1997 release. The database is available in various formats through the European Bioinformatics Institute (EBI) ftp server at: ftp://ftp.ebi.ac.uk/pub/databases/p53/ or by request from IARC (p53database@iarc.fr) and will be searchable through the SRS system in the near future. This report provides a description of the criteria for inclusion of data and of the current formats, a summary of the relevance ofp53 mutation analysis to clinical and biological questions, and a brief discussion of the prospects for future developments.

摘要

近年来,在人类癌症中发现的p53突变数量呈指数级增长。p53突变数据库包含人类肿瘤和细胞系p53基因中的点突变列表,这些突变是从已发表的文献中汇编而来,并通过电子媒体提供。该数据库现由国际癌症研究机构(IARC)维护,每年更新两次。当前版本包含5091条已发表突变的记录,预计在1997年1月发布时将超过6000条记录。该数据库可通过欧洲生物信息学研究所(EBI)的ftp服务器以多种格式获取,网址为:ftp://ftp.ebi.ac.uk/pub/databases/p53/ ,也可向IARC索取(p53database@iarc.fr),并且在不久的将来将可通过SRS系统进行搜索。本报告介绍了数据纳入标准和当前格式,总结了p53突变分析与临床和生物学问题的相关性,并简要讨论了未来发展前景。

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