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释放染色质上人类Y连锁基因的高分辨率荧光原位杂交

High-resolution fluorescence in situ hybridization of human Y-linked genes on released chromatin.

作者信息

Gläser B, Hierl T, Taylor K, Schiebel K, Zeitler S, Papadopoullos K, Rappold G, Schempp W

机构信息

Institute of Human Genetics and Anthropology, University of Freiburg, Germany.

出版信息

Chromosome Res. 1997 Feb;5(1):23-30. doi: 10.1023/a:1018437301461.

DOI:10.1023/a:1018437301461
PMID:9088640
Abstract

Genes within the differential region of the human Y chromosome do not recombine, and therefore the determination of their location depends on physical mapping. Yeast artificial chromosome (YAC) contigs spanning the euchromatic region of the human Y have become a powerful tool for the generation of an overlapping clone map. With this approach, however, complete physical mapping is difficult in Y euchromatic regions that are rich in repetitive sequences. We have, therefore, made use of the fluorescence in situ hybridization technique as an alternative strategy for physically mapping the PRKY and AMELY genes as well as the TSPY, RBM and DAZ gene families to human Y chromosomes in prometaphase and to extended Y chromatin in interphase. From our results, the following order of gene sequences in interval 3 of the short arm of the human Y chromosome is suggested: TSPY major with few RBM sequences interspersed-PRKY-AMELY-TSPY minor with few RBM sequences interspersed-cen. On the long arm, RBM sequences appear to be distributed over wide regions of intervals 5 and 6 with few TSPY sequences interspersed. Distal to an RBM signal cluster, a large cluster of DAZ signals is located with only a few DAZ and RBM signals overlapping in between the two clusters.

摘要

人类Y染色体差异区域内的基因不会发生重组,因此确定它们的位置依赖于物理图谱绘制。跨越人类Y染色体常染色质区域的酵母人工染色体(YAC)重叠群已成为生成重叠克隆图谱的有力工具。然而,用这种方法在富含重复序列的Y常染色质区域进行完整的物理图谱绘制很困难。因此,我们利用荧光原位杂交技术作为一种替代策略,将PRKY和AMELY基因以及TSPY、RBM和DAZ基因家族物理定位到有丝分裂前期的人类Y染色体和间期延伸的Y染色质上。根据我们的结果,提出了人类Y染色体短臂区间3中基因序列的以下顺序:穿插少量RBM序列的主要TSPY基因-PRKY-AMELY-穿插少量RBM序列的次要TSPY基因-着丝粒。在长臂上,RBM序列似乎分布在区间5和6的广泛区域,穿插少量TSPY序列。在一个RBM信号簇的远端,有一个大的DAZ信号簇,两个簇之间只有少量DAZ和RBM信号重叠。

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本文引用的文献

1
High-resolution fluorescence in situ hybridization of RBM- and TSPY-related cosmids on released Y chromatin in humans and pygmy chimpanzees.人类和侏儒黑猩猩释放的Y染色质上与RBM和TSPY相关的黏粒的高分辨率荧光原位杂交。
Chromosome Res. 1996 Apr;4(3):201-6. doi: 10.1007/BF02254960.
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Mapping the human Y chromosome by fingerprinting cosmid clones.通过指纹图谱法对黏粒克隆进行人类Y染色体作图。
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The IL-9 receptor gene (IL9R): genomic structure, chromosomal localization in the pseudoautosomal region of the long arm of the sex chromosomes, and identification of IL9R pseudogenes at 9qter, 10pter, 16pter, and 18pter.
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Fibre-fluorescence in situ hybridization unravels apparently seven DAZ genes or pseudogenes clustered within a Y-chromosome region frequently deleted in azoospermic males.纤维荧光原位杂交揭示出在无精子症男性中经常缺失的Y染色体区域内明显聚集着7个DAZ基因或假基因。
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Simian Y chromosomes: species-specific rearrangements of DAZ, RBM, and TSPY versus contiguity of PAR and SRY.猿猴Y染色体:DAZ、RBM和TSPY的物种特异性重排与PAR和SRY的连续性对比
Mamm Genome. 1998 Mar;9(3):226-31. doi: 10.1007/s003359900730.
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Comparative mapping of Xp22 genes in hominoids--evolutionary linear instability of their Y homologues.类人猿Xp22基因的比较图谱——其Y同源基因的进化线性不稳定性
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白细胞介素-9受体基因(IL9R):基因组结构、在性染色体长臂假常染色体区域的染色体定位,以及在9qter、10pter、16pter和18pter处白细胞介素-9受体假基因的鉴定。
Genomics. 1995 Sep 20;29(2):371-82. doi: 10.1006/geno.1995.9992.
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Report of the Second International Workshop on Y Chromosome Mapping 1995.1995年第二届Y染色体图谱国际研讨会报告
Cytogenet Cell Genet. 1996;73(1-2):33-76. doi: 10.1159/000134310.
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Nat Genet. 1996 Jun;13(2):227-9. doi: 10.1038/ng0696-227.
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Characterization of a YAC contig spanning the pseudoautosomal region.跨越假常染色体区域的酵母人工染色体(YAC)重叠群的特征分析。
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