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酵母第十五号染色体上一个54.7千碱基对片段的序列显示存在两个转运RNA和24个新的开放阅读框。

The sequence of a 54.7 kb fragment of yeast chromosome XV reveals the presence of two tRNAs and 24 new open reading frames.

作者信息

Valens M, Bohn C, Daignan-Fornier B, Dang V D, Bolotin-Fukuhara M

机构信息

Laboratoire de Génétique Moléculaire, Institut de Génétique et Microbiologie (URA 1354 du CNRS), Université Paris-Sud, Orsay, France.

出版信息

Yeast. 1997 Mar 30;13(4):379-90. doi: 10.1002/(SICI)1097-0061(19970330)13:4<379::AID-YEA85>3.0.CO;2-G.

Abstract

A 54,719 bp fragment from the right arm of Saccharomyces cerevisiae chromosome XV has been sequenced from the inserts of two cosmids (pEOA213 and pEOA217). The computer analysis of this sequence has revealed the presence of eight known genes (CKA2, CYC1, ALG8, TCM1, TMP1, UFE1, RTS2 and ASE1) and four open reading frames (ORFs) with strong homologies with known yeast genes (MLP1, SIS2 and HBS1 and the allantoin permease). The characteristics of the other ORFs and of the corresponding proteins do not allow postulation of a precise function. Several have features reminiscent of cytoskeleton or motor elements (keratin-like, myosin-like) and several others have characteristics of proteins which interact with DNA (extremely basic, b-Zip structure and/or acidic domains). Two tRNAs (tRNA(Lys) and tRNA(Pro)) have also been identified on this fragment. Many of these ORFs present similarities with ORFs located on chromosome XI, indicating some information reshuffling between the two chromosomal fragments.

摘要

已从两个黏粒(pEOA213和pEOA217)的插入片段中对酿酒酵母第十五号染色体右臂上一个54,719 bp的片段进行了测序。对该序列的计算机分析揭示了八个已知基因(CKA2、CYC1、ALG8、TCM1、TMP1、UFE1、RTS2和ASE1)以及四个与已知酵母基因(MLP1、SIS2和HBS1以及尿囊素通透酶)具有高度同源性的开放阅读框(ORF)。其他ORF及其相应蛋白质的特征无法推测出精确的功能。其中一些具有让人联想到细胞骨架或运动元件的特征(类角蛋白、类肌球蛋白),还有一些具有与DNA相互作用的蛋白质的特征(极端碱性、b-Zip结构和/或酸性结构域)。在该片段上还鉴定出了两个tRNA(tRNA(Lys)和tRNA(Pro))。这些ORF中有许多与位于第十一号染色体上的ORF具有相似性,表明这两个染色体片段之间存在一些信息重排。

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