Levitan B, Kauffman S
Santa Fe Institute, NM 87501, USA.
Mol Divers. 1995 Sep;1(1):53-68. doi: 10.1007/BF01715809.
Adaptive walks constitute an optimization technique for searching a space of possible solutions, for example, a space of different molecules. The goal is to find a point in space (a molecule) that is optimal or near-optimal in some property, generally referred to as the 'fitness', such as its ability to bind to a given receptor. Adaptive walking, an analog of natural selection, is a powerful technique for searching landscapes. However, errors in the measurements will cause errors in the adaptive walks. Mutant molecules of higher fitness may be ignored or mutants of lower fitness may be accepted. To examine the effect of measurement error on adaptive walks, we simulate single-agent hill-climbing walks on NK landscapes of varying ruggedness where Gaussian noise is added to the fitness values to model measurement error. We consider both constant measurement noise and noise whose variance decays exponentially with fitness. We show that fitness-independent noise can cause walks to 'melt' off the peaks in a landscape, wandering in larger regions as the noise increases. However, we also show that a small amount of noise actually helps the walk perform better than with no noise. For walks in which noise decreases exponentially with fitness, the most characteristic behavior is that the walk meanders throughout the landscape until it stumbles across a point of relatively high fitness, then it climbs the landscape towards the nearest peak. Finally, we characterize the balance between selection pressure and noise and show that there are several classes of walk dynamic behavior.
适应性游走是一种用于搜索可能解空间的优化技术,例如不同分子的空间。目标是在空间中找到一个在某些属性上最优或接近最优的点(一个分子),该属性通常被称为“适应度”,比如其与给定受体结合的能力。适应性游走是自然选择的一种类似物,是搜索景观的一种强大技术。然而,测量误差会导致适应性游走出现误差。更高适应度的突变分子可能被忽略,或者更低适应度的突变体可能被接受。为了研究测量误差对适应性游走的影响,我们在不同崎岖程度的NK景观上模拟单智能体爬山游走,其中高斯噪声被添加到适应度值中以模拟测量误差。我们考虑了恒定测量噪声以及方差随适应度呈指数衰减的噪声。我们表明,与适应度无关的噪声会导致游走“脱离”景观中的峰值,随着噪声增加在更大区域内徘徊。然而,我们也表明,少量噪声实际上有助于游走比无噪声时表现得更好。对于噪声随适应度呈指数下降的游走,最典型的行为是游走在整个景观中蜿蜒前行,直到偶然遇到一个适应度相对较高的点,然后朝着最近的峰值攀爬景观。最后,我们刻画了选择压力和噪声之间的平衡,并表明存在几类游走动态行为。