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禾本科伯克霍尔德菌新种,一种根际伯克霍尔德菌属物种,以及对[假单胞菌属]吩嗪菌、[假单胞菌属]吡咯菌素菌和[假单胞菌属]格拉特菌重新分类为伯克霍尔德菌属的评估。

Burkholderia graminis sp. nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia.

作者信息

Viallard V, Poirier I, Cournoyer B, Haurat J, Wiebkin S, Ophel-Keller K, Balandreau J

机构信息

Laboratoire d'Ecologie Microbienne du Sol, UMR5557 CNRS-Université, Lyon I, Villeurbanne, France.

出版信息

Int J Syst Bacteriol. 1998 Apr;48 Pt 2:549-63. doi: 10.1099/00207713-48-2-549.

DOI:10.1099/00207713-48-2-549
PMID:9731297
Abstract

In a survey of soil and wheat or maize rhizoplane bacteria isolated using a medium containing azelaic acid and tryptamine as sole carbon and nitrogen sources, respectively, a large proportion of Burkholderia-like bacteria were found. Among them, a homogeneous group of strains was identifiable based on phenotypic properties, fatty acid composition, DNA-DNA hybridizations and 16S rDNA sequences. According to molecular data, this group belongs to the genus Burkholderia but its weak similarity to previously described species suggests that it belongs to a novel species. Closest 16S rDNA phylogenetic neighbours of this species are Burkholderia caryophylli and two previously named Pseudomonas species which clearly appear to be part of the Burkholderia genus and were thus named Burkholderia glathei comb. nov. and Burkholderia phenazinium comb. nov. Strains of the new species are oxidase- and catalase-positive, produce indole and gelatinase, and use L-xylose, lactose, rhamnose, trehalose, D-lyxose, L-arabitol, xylitol and D-raffinose as sole carbon source. This novel taxon is named Burkholderia graminis. In the course of this study, [Pseudomonas] pyrrocinia also proved to be a member of the Burkholderia genus.

摘要

在一项针对分别以壬二酸和色胺作为唯一碳源和氮源的培养基分离出的土壤及小麦或玉米根际细菌的调查中,发现了很大比例的类伯克霍尔德菌。其中,基于表型特性、脂肪酸组成、DNA-DNA杂交和16S rDNA序列可鉴定出一组同质菌株。根据分子数据,该组属于伯克霍尔德菌属,但与先前描述的物种相似度较低,表明它属于一个新物种。该物种最接近的16S rDNA系统发育邻种是石竹伯克霍尔德菌和两个先前命名的假单胞菌物种,它们显然是伯克霍尔德菌属的一部分,因此被命名为格氏伯克霍尔德菌(Burkholderia glathei comb. nov.)和吩嗪伯克霍尔德菌(Burkholderia phenazinium comb. nov.)。新物种的菌株氧化酶和过氧化氢酶呈阳性,产生吲哚和明胶酶,并利用L-木糖、乳糖、鼠李糖、海藻糖、D-来苏糖、L-阿拉伯糖醇、木糖醇和D-棉子糖作为唯一碳源。这个新分类单元被命名为禾本科伯克霍尔德菌(Burkholderia graminis)。在这项研究过程中,吡咯菌素假单胞菌([Pseudomonas] pyrrocinia)也被证明是伯克霍尔德菌属的成员。

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