Yang W Z, Ko T P, Corselli L, Johnson R C, Yuan H S
Institute of Molecular Biology, Academia Sinica, Taipei, Taiwan, Republic of China.
Protein Sci. 1998 Sep;7(9):1875-83. doi: 10.1002/pro.5560070904.
The conversion from an alpha-helix to a beta-strand has received extensive attention since this structural change may induce many amyloidogenic proteins to self-assemble into fibrils and cause fatal diseases. Here we report the conversion of a peptide segment from a beta-strand to an alpha-helix by a single-site mutation as observed in the crystal structure of Fis mutant Pro26Ala determined at 2.0 A resolution. Pro26 in Fis occurs at the point where a flexible extended beta-hairpin arm leaves the core structure. Thus it can be classified as a "hinge proline" located at the C-terminal end of the beta2-strand and the N-terminal cap of the A alpha-helix. The replacement of Pro26 to alanine extends the A alpha-helix for two additional turns in one of the dimeric subunits; therefore, the structure of the peptide from residues 22 to 26 is converted from a beta-strand to an alpha-helix. This result confirms the structural importance of the proline residue located at the hinge region and may explain the mutant's reduced ability to activate Hin-catalyzed DNA inversion. The peptide (residues 20 to 26) in the second monomer subunit presumably retains its beta-strand conformation in the crystal; therefore, this peptide shows a "chameleon-like" character since it can adopt either an alpha-helix or a beta-strand structure in different environments. The structure of Pro26Ala provides an additional example where not only the protein sequence, but also non-local interactions determine the secondary structure of proteins.
从α-螺旋到β-链的转变受到了广泛关注,因为这种结构变化可能会诱导许多淀粉样蛋白自组装成纤维并导致致命疾病。在此,我们报告了在分辨率为2.0 Å下测定的Fis突变体Pro26Ala的晶体结构中观察到的一个肽段通过单点突变从β-链转变为α-螺旋的情况。Fis中的Pro26位于一个柔性延伸的β-发夹臂离开核心结构的位置。因此,它可被归类为位于β2-链C末端和Aα-螺旋N末端帽处的“铰链脯氨酸”。将Pro26替换为丙氨酸在其中一个二聚体亚基中使Aα-螺旋额外延伸了两圈;因此,从第22位到第26位残基的肽结构从β-链转变为α-螺旋。这一结果证实了位于铰链区的脯氨酸残基的结构重要性,并可能解释了该突变体激活Hin催化的DNA倒位能力降低的原因。第二个单体亚基中的肽(第20位到第26位残基)在晶体中可能保留其β-链构象;因此,该肽表现出“变色龙般的”特性,因为它在不同环境中可以采用α-螺旋或β-链结构。Pro26Ala的结构提供了另一个例子,说明不仅蛋白质序列,而且非局部相互作用也决定了蛋白质的二级结构。