Wower J, Zwieb C
Department of Animal and Dairy Sciences, Auburn University, Auburn, AL 36849-5415, USA.
Nucleic Acids Res. 1999 Jan 1;27(1):167. doi: 10.1093/nar/27.1.167.
As of September, 1998, a total of 43 sequences are contained within the tmRNA database (tmRDB). The tmRNA sequences are arranged alphabetically and ordered phylogenetically. The alignment of the tmRNAs emphasizes the basepairs that are supported by comparative sequence analysis and establishes minimal secondary structures for the known tmRNAs. A corresponding alignment of the predicted tmRNA-encoded tag peptides is presented. The tmRDB also offers a small number of RNA secondary structure diagrams and PDB-formatted three-dimensional models generated with the program ERNA-3D. The data are available freely at the URL http://psyche.uthct.edu/dbs/tmRDB/tmRDB.++ +html
截至1998年9月,转运信使核糖核酸数据库(tmRDB)共包含43个序列。转运信使核糖核酸序列按字母顺序排列并根据系统发育进行排序。转运信使核糖核酸的比对突出了通过比较序列分析得到支持的碱基对,并为已知的转运信使核糖核酸建立了最小二级结构。同时给出了预测的由转运信使核糖核酸编码的标签肽的相应比对。该转运信使核糖核酸数据库还提供了少量的RNA二级结构图以及用ERNA - 3D程序生成的PDB格式的三维模型。这些数据可在网址http://psyche.uthct.edu/dbs/tmRDB/tmRDB.++ +html免费获取。