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针对艰难梭菌16S - 23S rRNA基因间隔区的聚合酶链反应(PCR)以及由116种不同PCR核糖体分型组成的文库构建。

PCR targeted to the 16S-23S rRNA gene intergenic spacer region of Clostridium difficile and construction of a library consisting of 116 different PCR ribotypes.

作者信息

Stubbs S L, Brazier J S, O'Neill G L, Duerden B I

机构信息

Anaerobe Reference Unit, Department of Medical Microbiology and Public Health Laboratory, University Hospital of Wales, Cardiff, United Kingdom.

出版信息

J Clin Microbiol. 1999 Feb;37(2):461-3. doi: 10.1128/JCM.37.2.461-463.1999.

DOI:10.1128/JCM.37.2.461-463.1999
PMID:9889244
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC84342/
Abstract

A reference library of types of Clostridium difficile has been constructed by PCR ribotyping isolates (n = 2,030) from environmental (n = 89), hospital (n = 1,386), community practitioner (n = 395), veterinary (n = 27), and reference (n = 133) sources. The library consists of 116 distinct types identified on the basis of differences in profiles generated with PCR primers designed to amplify the 16S-23S rRNA gene intergenic spacer region. Isolates from 55% of infections in hospitals in the United Kingdom belonged to one ribotype (type 1), but this type was responsible for only 7. 5% of community infections.

摘要

通过对来自环境(89株)、医院(1386株)、社区医疗机构(395株)、兽医机构(27株)和参考菌株(133株)的艰难梭菌分离株(共2030株)进行PCR核糖体分型,构建了艰难梭菌类型参考文库。该文库包含116种不同类型,这些类型是根据用于扩增16S - 23S rRNA基因间隔区的PCR引物所产生的图谱差异来确定的。在英国医院55%的感染病例中分离出的菌株属于一种核糖体类型(1型),但该类型仅导致7.5%的社区感染。

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PCR targeted to the 16S-23S rRNA gene intergenic spacer region of Clostridium difficile and construction of a library consisting of 116 different PCR ribotypes.针对艰难梭菌16S - 23S rRNA基因间隔区的聚合酶链反应(PCR)以及由116种不同PCR核糖体分型组成的文库构建。
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本文引用的文献

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A novel toxinotyping scheme and correlation of toxinotypes with serogroups of Clostridium difficile isolates.一种新型艰难梭菌分离株毒素分型方案及毒素型与血清型的相关性
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PCR amplification of rRNA intergenic spacer regions as a method for epidemiologic typing of Clostridium difficile.聚合酶链反应扩增rRNA基因间隔区作为艰难梭菌流行病学分型方法
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Typing of Clostridium difficile strains by PCR-amplification of variable length 16S-23S rDNA spacer regions.通过聚合酶链反应扩增可变长度的16S - 23S核糖体DNA间隔区对艰难梭菌菌株进行分型。
J Gen Microbiol. 1993 Dec;139(12):3089-97. doi: 10.1099/00221287-139-12-3089.
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Serogrouping of Clostridium difficile strains by slide agglutination.通过玻片凝集法对艰难梭菌菌株进行血清分型。
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Immunoblots and plasmid fingerprints compared with serotyping and polyacrylamide gel electrophoresis for typing Clostridium difficile.免疫印迹法和质粒指纹图谱与血清分型及聚丙烯酰胺凝胶电泳用于艰难梭菌分型的比较。
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