Burne R A, Wen Z T, Chen Y Y, Penders J E
Center for Oral Biology, University of Rochester School of Medicine and Dentistry, Rochester, New York 14642, USA.
J Bacteriol. 1999 May;181(9):2863-71. doi: 10.1128/JB.181.9.2863-2871.1999.
The polymers of fructose, levan and inulin, as well as sucrose and raffinose, are substrates for the product of the fruA gene of Streptococcus mutans GS-5. The purpose of this study was to characterize the DNA immediately flanking fruA, to explore the regulation of expression of fruA by the carbohydrate source, and to begin to elucidate the molecular basis for differential expression of the gene. Located 3' to fruA was an open reading frame (ORF) with similarity to beta-fructosidases which was cotranscribed with fruA. A transcriptional initiation site, located an appropriate distance from an extended -10-like promoter, was mapped at 165 bp 5' to the fruA structural gene. By the use of computer algorithms, two overlapping, stable stem-loop sequences with the potential to function as rho-independent terminators were found in the 5' untranslated region. Catabolite response elements (CREs), which have been shown to govern carbon catabolite repression (CCR) by functioning as negative cis elements in gram-positive bacteria, were located close to the promoter. The levels of production of fruA mRNA and FruA were elevated in cells growing on levan, inulin, or sucrose as the sole carbohydrate source, and repression was observed when cells were grown on readily metabolizable hexoses. Deletion derivatives containing fusions of fruA promoter regions, lacking sequences 5' or 3' to the promoter, and a promoterless chloramphenicol acetyltransferase gene were used (i) to demonstrate the functionality of the promoter mapped by primer extension, (ii) to demonstrate that CCR of the fru operon requires the CRE that is located 3' to the promoter region, and (iii) to provide preliminary evidence that supports the involvement of an antitermination mechanism in fruA induction.
果糖聚合物、左聚糖和菊粉,以及蔗糖和棉子糖,都是变形链球菌GS-5 fruA基因产物的底物。本研究的目的是鉴定fruA侧翼的DNA,探索碳水化合物来源对fruA表达的调控,并开始阐明该基因差异表达的分子基础。fruA基因3'端有一个与β-果糖苷酶相似的开放阅读框(ORF),它与fruA基因共转录。通过引物延伸法确定了一个转录起始位点,该位点距一个延伸的类似-10的启动子有适当距离,位于fruA结构基因5'端165 bp处。利用计算机算法,在5'非翻译区发现了两个重叠的、稳定的茎环序列,它们有可能作为不依赖ρ因子的终止子发挥作用。分解代谢物反应元件(CREs)已被证明在革兰氏阳性菌中作为负性顺式元件发挥作用,从而调控碳分解代谢物阻遏(CCR),它们位于启动子附近。当以左聚糖、菊粉或蔗糖作为唯一碳水化合物来源生长时,细胞中fruA mRNA和FruA的产生水平升高,而当细胞以易于代谢的己糖生长时,则观察到阻遏现象。使用了含有fruA启动子区域融合体的缺失衍生物,这些融合体缺少启动子5'或3'端的序列,以及一个无启动子的氯霉素乙酰转移酶基因,用于(i)证明通过引物延伸定位的启动子的功能,(ii)证明fru操纵子的CCR需要位于启动子区域3'端的CRE,以及(iii)提供初步证据支持抗终止机制参与fruA诱导。