• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

酵母CHA1基因的转录抑制需要染色质重塑复合物RSC。

Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC.

作者信息

Moreira J M, Holmberg S

机构信息

Department of Genetics, Institute of Molecular Biology, University of Copenhagen, Oster Farimagsgade 2A, DK-1353 Copenhagen K, Denmark.

出版信息

EMBO J. 1999 May 17;18(10):2836-44. doi: 10.1093/emboj/18.10.2836.

DOI:10.1093/emboj/18.10.2836
PMID:10329629
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1171364/
Abstract

In eukaryotes, DNA is packaged into chromatin, a compact structure that must be disrupted when genes are transcribed by RNA polymerase II. For transcription to take place, chromatin is remodeled via nucleosome disruption or displacement, a fundamental transcriptional regulatory mechanism in eukaryotic organisms. Here we show that the yeast chromatin-remodeling complex, RSC (remodels the structure of chromatin), isolated on the basis of homology to the SWI/SNF complex, is required for proper transcriptional regulation and nucleosome positioning in the highly inducible CHA1 promoter. In the absence of Sth1p/Nps1p (a homolog of Swi2p/Snf2p) or of Swh3p (a homolog of Swi3p), expression of CHA1 in non-induced cells is increased to a level comparable with that of fully induced cells. Furthermore, in non-induced cells depleted for Sth1p/Nps1p or Swh3p, a nucleosome positioned over the TATA box of the CHA1 promoter is disrupted, an architectural change normally only observed during transcriptional induction. In addition, deletion of the gene-specific activator Cha4p did not affect derepression of CHA1 in cells depleted for Swh3p. Thus, CHA1 constitutes a target for the RSC complex, and we propose that RSC is essential for maintaining a repressive chromatin structure at the CHA1 promoter.

摘要

在真核生物中,DNA被包装成染色质,这是一种紧密的结构,当基因由RNA聚合酶II转录时必须被破坏。为了进行转录,染色质通过核小体的破坏或移位进行重塑,这是真核生物中一种基本的转录调控机制。在这里,我们表明,基于与SWI/SNF复合物的同源性分离出的酵母染色质重塑复合物RSC(重塑染色质结构),对于高度可诱导的CHA1启动子中的适当转录调控和核小体定位是必需的。在没有Sth1p/Nps1p(Swi2p/Snf2p的同源物)或Swh3p(Swi3p的同源物)的情况下,非诱导细胞中CHA1的表达增加到与完全诱导细胞相当的水平。此外,在耗尽Sth1p/Nps1p或Swh3p的非诱导细胞中,位于CHA1启动子TATA框上的核小体被破坏,这种结构变化通常只在转录诱导过程中观察到。此外,基因特异性激活剂Cha4p的缺失并不影响耗尽Swh3p的细胞中CHA1的去抑制。因此,CHA1构成了RSC复合物的一个靶点,我们提出RSC对于在CHA1启动子处维持抑制性染色质结构至关重要。

相似文献

1
Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC.酵母CHA1基因的转录抑制需要染色质重塑复合物RSC。
EMBO J. 1999 May 17;18(10):2836-44. doi: 10.1093/emboj/18.10.2836.
2
Nucleosome structure of the yeast CHA1 promoter: analysis of activation-dependent chromatin remodeling of an RNA-polymerase-II-transcribed gene in TBP and RNA pol II mutants defective in vivo in response to acidic activators.酵母CHA1启动子的核小体结构:对TBP和RNA聚合酶II突变体中一个RNA聚合酶II转录基因的激活依赖性染色质重塑的分析,这些突变体在体内对酸性激活剂有缺陷。
EMBO J. 1998 Oct 15;17(20):6028-38. doi: 10.1093/emboj/17.20.6028.
3
Mediator, TATA-binding protein, and RNA polymerase II contribute to low histone occupancy at active gene promoters in yeast.中介体、TATA结合蛋白和RNA聚合酶II导致酵母中活跃基因启动子处组蛋白占有率较低。
J Biol Chem. 2014 May 23;289(21):14981-95. doi: 10.1074/jbc.M113.529354. Epub 2014 Apr 11.
4
Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins.Sth1p是酿酒酵母中Snf2p/Swi2p的同源物,是RSC中一种必需的ATP酶,在与组蛋白和染色质相关蛋白的相互作用方面与Snf/Swi不同。
Genetics. 1998 Nov;150(3):987-1005. doi: 10.1093/genetics/150.3.987.
5
RSC, an essential, abundant chromatin-remodeling complex.RSC,一种必需的、丰富的染色质重塑复合体。
Cell. 1996 Dec 27;87(7):1249-60. doi: 10.1016/s0092-8674(00)81820-6.
6
Chromatin-mediated transcriptional regulation by the yeast architectural factors NHP6A and NHP6B.酵母结构因子NHP6A和NHP6B介导的染色质转录调控
EMBO J. 2000 Dec 15;19(24):6804-13. doi: 10.1093/emboj/19.24.6804.
7
Activation of Saccharomyces cerevisiae HIS3 results in Gcn4p-dependent, SWI/SNF-dependent mobilization of nucleosomes over the entire gene.酿酒酵母HIS3的激活导致在整个基因上Gcn4p依赖、SWI/SNF依赖的核小体移动。
Mol Cell Biol. 2006 Nov;26(22):8607-22. doi: 10.1128/MCB.00678-06. Epub 2006 Sep 18.
8
Dispersed mutations in histone H3 that affect transcriptional repression and chromatin structure of the CHA1 promoter in Saccharomyces cerevisiae.影响酿酒酵母中CHA1启动子转录抑制和染色质结构的组蛋白H3中的分散突变。
Eukaryot Cell. 2008 Oct;7(10):1649-60. doi: 10.1128/EC.00233-08. Epub 2008 Jul 25.
9
A study of biochemical and functional interactions of Htl1p, a putative component of the Saccharomyces cerevisiae, Rsc chromatin-remodeling complex.一项关于酿酒酵母Rsc染色质重塑复合物的假定组分Htl1p的生化及功能相互作用的研究。
Gene. 2007 Jun 15;395(1-2):72-85. doi: 10.1016/j.gene.2007.02.002. Epub 2007 Feb 20.
10
Mediator requirement downstream of chromatin remodeling during transcriptional activation of CHA1 in yeast.酵母中CHA1转录激活过程中染色质重塑下游的中介体需求
J Biol Chem. 2008 Feb 29;283(9):5276-86. doi: 10.1074/jbc.M708266200. Epub 2007 Dec 19.

引用本文的文献

1
Bromodomains regulate dynamic targeting of the PBAF chromatin-remodeling complex to chromatin hubs.溴结构域调节 PBAF 染色质重塑复合物到染色质枢纽的动态靶向。
Biophys J. 2022 May 3;121(9):1738-1752. doi: 10.1016/j.bpj.2022.03.027. Epub 2022 Mar 30.
2
The RSC (Remodels the Structure of Chromatin) complex of Candida albicans shows compositional divergence with distinct roles in regulating pathogenic traits.白色念珠菌的 RSC(重塑染色质结构)复合物表现出组成上的差异,在调节致病特征方面发挥着独特的作用。
PLoS Genet. 2020 Nov 5;16(11):e1009071. doi: 10.1371/journal.pgen.1009071. eCollection 2020 Nov.
3
Dynamic regulation of transcription factors by nucleosome remodeling.核小体重塑对转录因子的动态调控
Elife. 2015 Jun 5;4:e06249. doi: 10.7554/eLife.06249.
4
Histone hypoacetylation-activated genes are repressed by acetyl-CoA- and chromatin-mediated mechanism.组蛋白低乙酰化激活的基因通过乙酰辅酶A和染色质介导的机制被抑制。
Biochim Biophys Acta. 2014 Sep;1839(9):751-63. doi: 10.1016/j.bbagrm.2014.05.029. Epub 2014 Jun 5.
5
MRN1 implicates chromatin remodeling complexes and architectural factors in mRNA maturation.MRN1 参与 mRNA 成熟过程中的染色质重塑复合物和结构因子。
PLoS One. 2012;7(9):e44373. doi: 10.1371/journal.pone.0044373. Epub 2012 Sep 18.
6
Chromatin and transcription in yeast.酵母中的染色质与转录。
Genetics. 2012 Feb;190(2):351-87. doi: 10.1534/genetics.111.132266.
7
Selective removal of promoter nucleosomes by the RSC chromatin-remodeling complex.RSC 染色质重塑复合物选择性去除启动子核小体。
Nat Struct Mol Biol. 2011 Jul 3;18(8):881-5. doi: 10.1038/nsmb.2072.
8
The RSC chromatin remodelling enzyme has a unique role in directing the accurate positioning of nucleosomes.RSC 染色质重塑酶在指导核小体的精确定位方面具有独特的作用。
EMBO J. 2011 Apr 6;30(7):1277-88. doi: 10.1038/emboj.2011.43. Epub 2011 Feb 22.
9
Nucleosome positioning and gene regulation: advances through genomics.核小体定位与基因调控:基因组学的进展
Nat Rev Genet. 2009 Mar;10(3):161-72. doi: 10.1038/nrg2522.
10
Recruitment of a chromatin remodelling complex by the Hog1 MAP kinase to stress genes.Hog1丝裂原活化蛋白激酶将染色质重塑复合物招募至应激基因。
EMBO J. 2009 Feb 18;28(4):326-36. doi: 10.1038/emboj.2008.299. Epub 2009 Jan 15.

本文引用的文献

1
Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits.由SWI/SNF亚基重构核心染色质重塑复合体。
Mol Cell. 1999 Feb;3(2):247-53. doi: 10.1016/s1097-2765(00)80315-9.
2
ISWI is an ATP-dependent nucleosome remodeling factor.ISWI是一种依赖ATP的核小体重塑因子。
Mol Cell. 1999 Feb;3(2):239-45. doi: 10.1016/s1097-2765(00)80314-7.
3
Histone octamer transfer by a chromatin-remodeling complex.染色质重塑复合物介导的组蛋白八聚体转移
Cell. 1999 Feb 5;96(3):389-92. doi: 10.1016/s0092-8674(00)80551-6.
4
Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins.Sth1p是酿酒酵母中Snf2p/Swi2p的同源物,是RSC中一种必需的ATP酶,在与组蛋白和染色质相关蛋白的相互作用方面与Snf/Swi不同。
Genetics. 1998 Nov;150(3):987-1005. doi: 10.1093/genetics/150.3.987.
5
Nucleosome structure of the yeast CHA1 promoter: analysis of activation-dependent chromatin remodeling of an RNA-polymerase-II-transcribed gene in TBP and RNA pol II mutants defective in vivo in response to acidic activators.酵母CHA1启动子的核小体结构:对TBP和RNA聚合酶II突变体中一个RNA聚合酶II转录基因的激活依赖性染色质重塑的分析,这些突变体在体内对酸性激活剂有缺陷。
EMBO J. 1998 Oct 15;17(20):6028-38. doi: 10.1093/emboj/17.20.6028.
6
Direct interaction between Rsc6 and Rsc8/Swh3,two proteins that are conserved in SWI/SNF-related complexes.Rsc6与Rsc8/Swh3之间的直接相互作用,这两种蛋白质在SWI/SNF相关复合物中是保守的。
Nucleic Acids Res. 1998 Aug 15;26(16):3739-45. doi: 10.1093/nar/26.16.3739.
7
Activated RSC-nucleosome complex and persistently altered form of the nucleosome.活化的RSC-核小体复合物以及核小体的持续改变形式。
Cell. 1998 Jul 10;94(1):29-34. doi: 10.1016/s0092-8674(00)81218-0.
8
Human SWI/SNF interconverts a nucleosome between its base state and a stable remodeled state.人类SWI/SNF可使核小体在其基础状态和稳定的重塑状态之间相互转换。
Cell. 1998 Jul 10;94(1):17-27. doi: 10.1016/s0092-8674(00)81217-9.
9
A mutation in NPS1/STH1, an essential gene encoding a component of a novel chromatin-remodeling complex RSC, alters the chromatin structure of Saccharomyces cerevisiae centromeres.NPS1/STH1是一个编码新型染色质重塑复合物RSC组分的必需基因,该基因的突变会改变酿酒酵母着丝粒的染色质结构。
Nucleic Acids Res. 1998 Jul 1;26(13):3286-92. doi: 10.1093/nar/26.13.3286.
10
Perturbation of nucleosome core structure by the SWI/SNF complex persists after its detachment, enhancing subsequent transcription factor binding.SWI/SNF复合物对核小体核心结构的扰动在其脱离后仍然存在,增强了后续转录因子的结合。
Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):4947-52. doi: 10.1073/pnas.95.9.4947.