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苏云金芽孢杆菌分离株中RAPD-PCR法检测遗传多态性

Detection of genetic polymorphism by RAPD-PCR among isolates of Bacillus thuringiensis.

作者信息

Malkawi H I, al-Momani F, Meqdam M M, Saadoun I, Mohammad M J

机构信息

Dept. of Applied Biological Sciences, Jordan University of Science & Technology, Irbid-Jordan.

出版信息

New Microbiol. 1999 Jul;22(3):241-7.

Abstract

Sixteen isolates of Bacillus thuringiensis recovered from different Jordanian habitats were compared using random amplification of polymorphic DNA (RAPD) to determine whether they could be differentiated at the molecular level. Total genomic DNA from each isolate and three reference strains were amplified using 10-mer primers. Electrophoretic analysis of the amplification products revealed the incidence of polymorphism among the isolates. Pair-wise comparisons of polymorphic products were used to construct a dendrogram applying the cluster analysis. Fifteen of the isolates were all in one major cluster which was divided into six small groups. Such analysis showed some regional variation among the isolates, but did not indicate a clearly defined habitat locational pattern of the DNA polymorphism.

摘要

从约旦不同栖息地分离出的16株苏云金芽孢杆菌,通过随机扩增多态性DNA(RAPD)进行比较,以确定它们在分子水平上是否可以区分。使用10聚体引物对每个分离株和三个参考菌株的总基因组DNA进行扩增。对扩增产物的电泳分析揭示了分离株之间多态性的发生率。利用聚类分析,通过对多态性产物的两两比较构建了一个树形图。15个分离株都在一个主要聚类中,该聚类又分为六个小群体。这种分析显示了分离株之间存在一些区域差异,但并未表明DNA多态性有明确的栖息地位置模式。

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