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远端指间关节骨关节炎易感基因座的全基因组扫描:2q上一个基因座的证据

Genome scan for predisposing loci for distal interphalangeal joint osteoarthritis: evidence for a locus on 2q.

作者信息

Leppävuori J, Kujala U, Kinnunen J, Kaprio J, Nissilä M, Heliövaara M, Klinger N, Partanen J, Terwilliger J D, Peltonen L

机构信息

Department of Human Molecular Genetics, National Public Health Institute, University of Helsinki, Finland.

出版信息

Am J Hum Genet. 1999 Oct;65(4):1060-7. doi: 10.1086/302569.

Abstract

The genetic contribution to common forms of osteoarthritis (OA) is well established but poorly understood. We performed a genome scan, using 302 markers for loci predisposing to distal interphalangeal joint (DIP) OA. To minimize genetic heterogeneity in our study sample, we identified siblings with a severe, radiologically defined phenotype from the nationwide registers of Finland. In the initial genome scan, linkage analysis in 27 sibships gave a pairwise LOD score (Z) >1.00 with nine of the screening markers. In the second stage, additional markers and family members were genotyped in these chromosomal regions. On 2q12-q13, IL1R1 resulted in Z=2.34 at recombination fraction (theta) 0, allowing a dominant mode of inheritance. Association analysis of markers D2S2264, IL1R1, D2S373, and D2S1789 jointly provided some evidence for a shared haplotype among the affected individuals (P value of.012). Also, multipoint nonparametric linkage analysis yielded a P value of.0001 near the locus IL1R1 and P=.0007 approximately 20 cM telomeric near marker D2S1399, which, in two-point analysis, gave Z=1.48 (straight theta=. 02). This chromosomal region on 2q harbors the interleukin 1 gene cluster and, thus, represents a good candidate region for inflammatory and autoimmune disorders. Three additional chromosomal regions-4q26-q27, 7p15-p21, and Xcen-also provided some evidence for linkage, and further analyses would be justified to clarify their potential involvement in the genetic predisposition to DIP OA.

摘要

遗传因素对常见类型骨关节炎(OA)的影响已得到充分证实,但人们对此了解甚少。我们进行了一项基因组扫描,使用302个标记来定位易患远端指间关节(DIP)OA的基因座。为了尽量减少研究样本中的遗传异质性,我们从芬兰全国登记册中识别出具有严重、经放射学定义表型的同胞。在最初的基因组扫描中,对27个同胞对进行连锁分析,结果显示9个筛选标记的成对LOD分数(Z)>1.00。在第二阶段,对这些染色体区域的其他标记和家庭成员进行基因分型。在2q12 - q13区域,IL1R1在重组率(θ)为0时,Z = 2.34,支持显性遗传模式。对标记D2S2264、IL1R1、D2S373和D2S1789进行联合关联分析,为受影响个体中存在共享单倍型提供了一些证据(P值为0.012)。此外,多点非参数连锁分析在IL1R1基因座附近产生的P值为0.0001,在标记D2S1399附近约20 cM端粒处P = 0.0007,在两点分析中Z = 1.48(直接θ = 0.02)。2q上的这个染色体区域包含白细胞介素1基因簇,因此是炎症和自身免疫性疾病的一个良好候选区域。另外三个染色体区域——4q26 - q27、7p15 - p21和Xcen——也提供了一些连锁证据,进一步分析以阐明它们在DIP OA遗传易感性中的潜在作用是合理的。

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