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在信息衰减的挑战下“生存”:随机校正模型与超循环

"Living" under the challenge of information decay: the stochastic corrector model vs. hypercycles.

作者信息

Zintzaras Elias, Santos Mauro, Szathmary Eors

机构信息

Collegium Budapest, Institute for Advanced Study, Szentháromság u. 2, H-1014, Budapest, Hungary.

出版信息

J Theor Biol. 2002 Jul 21;217(2):167-81. doi: 10.1006/jtbi.2002.3026.

Abstract

The combined problem of having a large genome size when the accuracy of replication was a limiting factor is probably the most difficult transition to explain at the late stages of RNA world. One solution has been to suggest the existence of a cyclically coupled system of autocatalytic and cross-catalytic molecular mutualists, where each member helps the following member and receives help from the preceding one (i.e., a "hypercycle"). However, such a system is evolutionarily unstable when mutations are taken into account because it lacks individuality. In time, the cooperating networks of genes should have been encapsulated in a cell-like structure. But once the cell was invented, it closely aligned genes' common interests and helped to reduce gene selfishness, so there was no need for hypercycles. A simple package of competing genes, described by the "stochastic corrector model" (SCM), could have provided the solution. Until now, there is no clear demonstration that the proposed mechanisms (compartmentalized hypercycles and the stochastic corrector model) do in fact solve the error threshold problem. Here, we present a Monte Carlo model to test the viability of protocell populations that enclose a hypercyclic (HPC) or a non-hypercyclic (SCM) system when faced with realistic mutation rates before the evolution of efficient enzymic machinery for replication. The numerical results indicate that both systems are efficient information integrators and are able to overcome the danger of information decay in the absence of accurate replication. However, a population of SCM protocells can tolerate higher deleterious mutation rates and reaches an equilibrium mutational load lower than that in a population of HPC protocells.

摘要

当复制准确性成为限制因素时,基因组规模庞大这一综合问题,可能是RNA世界后期最难解释的转变。一种解决方案是提出存在一种自催化和交叉催化分子共生体的循环耦合系统,其中每个成员帮助下一个成员,并从前一个成员那里获得帮助(即“超循环”)。然而,考虑到突变时,这样的系统在进化上是不稳定的,因为它缺乏个体性。随着时间的推移,基因的合作网络应该被封装在类似细胞的结构中。但是一旦细胞被创造出来,它紧密地协调了基因的共同利益,并有助于减少基因的自私性,所以就不再需要超循环了。一个由“随机校正模型”(SCM)描述的简单的竞争基因组合可能提供了解决方案。到目前为止,还没有明确的证据表明所提出的机制(区室化超循环和随机校正模型)实际上解决了错误阈值问题。在这里,我们提出一个蒙特卡罗模型,以测试在高效复制酶机制进化之前,面对实际突变率时,包含超循环(HPC)或非超循环(SCM)系统的原始细胞群体的生存能力。数值结果表明,这两种系统都是高效的信息整合器,并且能够在缺乏精确复制的情况下克服信息衰减的危险。然而,SCM原始细胞群体能够容忍更高的有害突变率,并且达到的平衡突变负荷低于HPC原始细胞群体。

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