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海栖交替单胞菌新种,从韩国东海海水中分离得到。

Alteromonas marina sp. nov., isolated from sea water of the East Sea in Korea.

作者信息

Yoon Jung-Hoon, Kim In-Gi, Kang Kook Hee, Oh Tae-Kwang, Park Yong-Ha

机构信息

Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Korea.

National Research Laboratory of Molecular Ecosystematics, Institute of Probionic, Probionic Corporation, Bio-venture Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Korea.

出版信息

Int J Syst Evol Microbiol. 2003 Sep;53(Pt 5):1625-1630. doi: 10.1099/ijs.0.02536-0.

Abstract

Two Gram-negative, motile, non-spore-forming and moderately halophilic rods (strains SW-47(T) and SW-49) were isolated from sea water of the East Sea in Korea and subjected to a polyphasic taxonomic study. The two strains grew optimally between 30 and 37 degrees C, and grew at 4 and 44 degrees C but not at temperatures above 45 degrees C. They grew optimally in the presence of 2-5 % (w/v) NaCl, but did not grow in the absence of NaCl. Strains SW-47(T) and SW-49 had ubiquinone-8 (Q-8) as the predominant respiratory lipoquinone and C(16 : 1) omega7c and/or iso-C(15 : 0) 2OH, C(16 : 0) and C(18 : 1) omega7c as the major fatty acids, which are consistent with the corresponding data for Alteromonas macleodii. The DNA G+C contents of strains SW-47(T) and SW-49 were 45 and 44 mol%, respectively. Strains SW-47(T) and SW-49 showed a high level of 16S rDNA sequence similarity (99.9 %) and a mean level of DNA-DNA relatedness of 96.5 %. Phylogenetic analyses based on 16S rDNA sequences showed that the two strains form a coherent cluster with A. macleodii. Strains SW-47(T) and SW-49 exhibited levels of 16S rDNA sequence similarity of 99.3 and 99.1 %, respectively, with A. macleodii DSM 6062(T) and of less than 89.4 % with other species used in the phylogenetic analyses. Alteromonas fuliginea CIP 105339(T) was found to be more closely related to the genus Pseudoalteromonas than to the genus ALTEROMONAS: On the basis of phenotypic properties and phylogenetic and genomic data, strains SW-47(T) and SW-49 represent a new species of the genus Alteromonas, for which the name Alteromonas marina (type strain SW-47(T)=KCCM 41638(T)=JCM 11804(T)) is proposed.

摘要

从韩国东海海水中分离出两株革兰氏阴性、具运动性、不产芽孢且嗜盐适度的杆菌(菌株SW-47(T)和SW-49),并对其进行了多相分类研究。这两株菌在30至37摄氏度之间生长最佳,在4摄氏度和44摄氏度能生长,但在高于45摄氏度时不生长。它们在2-5%(w/v)NaCl存在下生长最佳,但在无NaCl时不生长。菌株SW-47(T)和SW-49以泛醌-8(Q-8)作为主要呼吸性脂醌,以C(16 : 1) ω-7c和/或异-C(15 : 0) 2OH、C(16 : 0)和C(18 : 1) ω-7c作为主要脂肪酸,这与嗜麦芽寡养单胞菌的相应数据一致。菌株SW-47(T)和SW-49的DNA G+C含量分别为45 mol%和44 mol%。菌株SW-47(T)和SW-49显示出高水平的16S rDNA序列相似性(99.9%)和平均水平的DNA-DNA相关性96.5%。基于16S rDNA序列的系统发育分析表明,这两株菌与嗜麦芽寡养单胞菌形成一个连贯的聚类。菌株SW-47(T)和SW-49与嗜麦芽寡养单胞菌DSM 6062(T)的16S rDNA序列相似性分别为99.3%和99.1%,与系统发育分析中使用的其他物种的相似性小于89.4%。发现暗黑寡养单胞菌CIP 105339(T)与假交替单胞菌属的关系比与交替单胞菌属的关系更密切:基于表型特征、系统发育和基因组数据,菌株SW-47(T)和SW-49代表交替单胞菌属的一个新物种,为此提出名称为海洋交替单胞菌(模式菌株SW-47(T)=KCCM 41638(T)=JCM 11804(T))。

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