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联苯和多氯联苯降解菌株LB400T及其亲缘菌株分类为新种伯克霍尔德氏菌(Burkholderia xenovorans)

Classification of the biphenyl- and polychlorinated biphenyl-degrading strain LB400T and relatives as Burkholderia xenovorans sp. nov.

作者信息

Goris Johan, De Vos Paul, Caballero-Mellado Jesús, Park Joonhong, Falsen Enevold, Quensen John F, Tiedje James M, Vandamme Peter

机构信息

Laboratorium voor Microbiologie, Universiteit Gent, B-9000 Gent, Belgium.

P. de Ecología Molecular y Microbiana, Centro de Investigación sobre Fijación de Nitrógeno, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.

出版信息

Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1677-1681. doi: 10.1099/ijs.0.63101-0.

Abstract

Strain LB400T is the best-studied polychlorinated biphenyl (PCB) degrader. This organism has previously been allocated in the genus Burkholderia, since its 16S rRNA gene sequence shows 98.6 % sequence similarity to the type strains of Burkholderia graminis and Burkholderia terricola. A polyphasic study was undertaken to clarify the actual taxonomic position of this biotechnologically important organism and of two strains, one recovered from a blood culture vial and one from a coffee plant rhizosphere, both of which resembled strain LB400T in their whole-cell protein patterns. DNA-DNA hybridization experiments revealed that the three strains represented a single novel species, for which the name Burkholderia xenovorans sp. nov. is proposed. Strains of this novel species can be differentiated phenotypically from nearly all other Burkholderia species by their inability to assimilate L-arabinose. The whole-cell fatty acid profile of B. xenovorans strains is consistent with their classification in the genus Burkholderia, with 18 : 1omega7c, 16 : 1omega7c, 16 : 0, 14 : 0 3OH, 16 : 0 3OH, 17 : 0 cyclo and 14 : 0 being the most abundant fatty acids. The G + C content of the species varies between 62.4 and 62.9 mol%. The type strain of B. xenovorans is LB400T (= LMG 21463T = CCUG 46959T = NRRL B-18064T).

摘要

菌株LB400T是研究最为深入的多氯联苯(PCB)降解菌。由于该菌的16S rRNA基因序列与禾本科伯克霍尔德菌(Burkholderia graminis)和土壤伯克霍尔德菌(Burkholderia terricola)的模式菌株显示出98.6%的序列相似性,此前它被归为伯克霍尔德菌属。开展了一项多相研究,以明确这种具有重要生物技术意义的菌株以及另外两株菌的实际分类地位,其中一株从血培养瓶中分离得到,另一株从咖啡植物根际分离得到,这两株菌的全细胞蛋白质图谱均与菌株LB400T相似。DNA - DNA杂交实验表明,这三株菌代表一个新的物种,为此提出新物种名为嗜异源伯克霍尔德菌(Burkholderia xenovorans sp. nov.)。该新物种的菌株因无法同化L -阿拉伯糖,在表型上可与几乎所有其他伯克霍尔德菌属物种区分开来。嗜异源伯克霍尔德菌菌株的全细胞脂肪酸谱与其在伯克霍尔德菌属中的分类一致,其中18 : 1ω7c、16 : 1ω7c、16 : 0、14 : 0 3OH、16 : 0 3OH、17 : 0环丙烷和14 : 0为最丰富的脂肪酸。该物种的G + C含量在62.4至62.9 mol%之间。嗜异源伯克霍尔德菌的模式菌株为LB400T(= LMG 21463T = CCUG 46959T = NRRL B - 18064T)。

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