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纤细弯曲杆菌新属、新种及普氏草螺菌新种的提议,这些菌株分离自井水,以及对[假单胞菌属]胡氏菌、[假单胞菌属]披针叶菌、[水生螺菌属]精致菌和[水生螺菌属]自养菌的重新分类,分别为胡氏草螺菌新组合、披针叶弯曲杆菌新组合、精致弯曲杆菌新组合和自养草螺菌新组合

Proposals of Curvibacter gracilis gen. nov., sp. nov. and Herbaspirillum putei sp. nov. for bacterial strains isolated from well water and reclassification of [Pseudomonas] huttiensis, [Pseudomonas] lanceolata, [Aquaspirillum] delicatum and [Aquaspirillum] autotrophicum as Herbaspirillum huttiense comb. nov., Curvibacter lanceolatus comb. nov., Curvibacter delicatus comb. nov. and Herbaspirillum autotrophicum comb. nov.

作者信息

Ding Linxian, Yokota Akira

机构信息

Laboratory of Bioresources, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.

出版信息

Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2223-2230. doi: 10.1099/ijs.0.02975-0.

Abstract

Two strains of curved bacteria, 7-1(T) and 7-2(T), isolated from well water, were phylogenetically examined to determine their taxonomic position. Strain 7-1(T) is a Gram-negative, slightly curved rod. Analysis of the 16S rRNA gene sequence showed that strain 7-1(T) formed a cluster with [Aquaspirillum] delicatum and [Pseudomonas] lanceolata. It has some similar characteristics to [A.] delicatum and [P.] lanceolata, but has sufficient distance to separate it from other genera. DNA-DNA hybridization analysis, as well as chemotaxonomic and morphological studies, demonstrated that strain 7-1(T), [A.] delicatum and [P.] lanceolata belong to a new genus, Curvibacter gen. nov. Strain 7-1(T) (=IAM 15033(T)=ATCC BAA-807(T)) is classified as the type strain of Curvibacter gracilis gen. nov., sp. nov., and [A.] delicatum and [P.] lanceolata are classified as Curvibacter delicatus comb. nov. and Curvibacter lanceolatus comb. nov., respectively. Strain 7-2(T) is a Gram-negative spirillum. Phylogenetic study based on the 16S rRNA gene sequences showed that it formed a cluster with the members of the genus Herbaspirillum, [Pseudomonas] huttiensis and [Aquaspirillum] autotrophicum. The classification is therefore proposed of strain 7-2(T) (=IAM 15032(T)=ATCC BAA-806(T)) as the type strain of Herbaspirillum putei sp. nov., and [P.] huttiensis and [A.] autotrophicum are transferred to the genus Herbaspirillum as Herbaspirillum huttiense comb. nov. and Herbaspirillum autotrophicum comb. nov., respectively.

摘要

从井水分离出的两株弯曲菌,7-1(T)和7-2(T),进行了系统发育分析以确定它们的分类地位。菌株7-1(T)是革兰氏阴性、稍弯曲的杆菌。16S rRNA基因序列分析表明,菌株7-1(T)与纤细水生螺菌(Aquaspirillum delicatum)和披针假单胞菌(Pseudomonas lanceolata)形成一个簇。它与纤细水生螺菌和披针假单胞菌有一些相似特征,但有足够的差异将其与其他属区分开来。DNA-DNA杂交分析以及化学分类和形态学研究表明,菌株7-1(T)、纤细水生螺菌和披针假单胞菌属于一个新属,弯曲杆菌属(Curvibacter gen. nov.)。菌株7-1(T)(=IAM 15033(T)=ATCC BAA-807(T))被分类为纤细弯曲杆菌(Curvibacter gracilis gen. nov., sp. nov.)的模式菌株,纤细水生螺菌和披针假单胞菌分别被分类为纤细弯曲杆菌(Curvibacter delicatus comb. nov.)和披针弯曲杆菌(Curvibacter lanceolatus comb. nov.)。菌株7-2(T)是革兰氏阴性螺菌。基于16S rRNA基因序列的系统发育研究表明,它与草螺菌属(Herbaspirillum)、胡氏假单胞菌(Pseudomonas huttiensis)和自养水生螺菌(Aquaspirillum autotrophicum)的成员形成一个簇。因此,建议将菌株7-2(T)(=IAM 15032(T)=ATCC BAA-806(T))分类为井水草螺菌(Herbaspirillum putei sp. nov.)的模式菌株,胡氏假单胞菌和自养水生螺菌分别作为胡氏草螺菌(Herbaspirillum huttiense comb. nov.)和自养草螺菌(Herbaspirillum autotrophicum comb. nov.)转移到草螺菌属。

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