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含脂噬菌体PM2主要衣壳蛋白P2的初步晶体学分析。

Preliminary crystallographic analysis of the major capsid protein P2 of the lipid-containing bacteriophage PM2.

作者信息

Abrescia Nicola G A, Kivelä Hanna M, Grimes Jonathan M, Bamford Jaana K H, Bamford Dennis H, Stuart David I

机构信息

Division of Structural Biology, The Wellcome Trust Centre for Human Genetics, University of Oxford, Headington, Oxford OX3 7BN, England.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Aug 1;61(Pt 8):762-5. doi: 10.1107/S174430910502141X. Epub 2005 Jul 30.

Abstract

PM2 (Corticoviridae) is a dsDNA bacteriophage which contains a lipid membrane beneath its icosahedral capsid. In this respect it resembles bacteriophage PRD1 (Tectiviridae), although it is not known whether the similarity extends to the detailed molecular architecture of the virus, for instance the fold of the major coat protein P2. Structural analysis of PM2 has been initiated and virus-derived P2 has been crystallized by sitting-nanodrop vapour diffusion. Crystals of P2 have been obtained in space group P2(1)2(1)2, with two trimers in the asymmetric unit and unit-cell parameters a = 171.1, b = 78.7, c = 130.1 A. The crystals diffract to 4 A resolution at the ESRF BM14 beamline (Grenoble, France) and the orientation of the non-crystallographic threefold axes, the spatial relationship between the two trimers and the packing of the trimers within the unit cell have been determined. The trimers form tightly packed layers consistent with the crystal morphology, possibly recapitulating aspects of the arrangement of subunits in the virus.

摘要

PM2(皮质病毒科)是一种双链DNA噬菌体,在其二十面体衣壳下方含有一层脂质膜。在这方面,它类似于噬菌体PRD1(覆盖病毒科),不过尚不清楚这种相似性是否延伸至病毒的详细分子结构,例如主要衣壳蛋白P2的折叠情况。已启动对PM2的结构分析,并且通过坐滴纳米滴气相扩散法使源自病毒的P2结晶。P2晶体在空间群P2(1)2(1)2中获得,不对称单元中有两个三聚体,晶胞参数a = 171.1、b = 78.7、c = 130.1 Å。这些晶体在欧洲同步辐射装置BM14光束线(法国格勒诺布尔)上衍射至4 Å分辨率,并且已确定非晶体学三重轴的方向、两个三聚体之间的空间关系以及三聚体在晶胞内的堆积情况。三聚体形成与晶体形态一致的紧密堆积层,可能重现了病毒中亚基排列的某些方面。

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