Zhou Donghua H, Kloepper Kathryn D, Winter Kem A, Rienstra Chad M
Department of Chemistry, Center for Biophysics and Computational Biology, University of Illinois, Urbana, IL 61801, USA.
J Biomol NMR. 2006 Apr;34(4):245-57. doi: 10.1007/s10858-006-0026-6.
We demonstrate improved 3D 13C-13C-13C chemical shift correlation experiments for solid proteins, utilizing band-selective coherence transfer, scalar decoupling and homonuclear zero-quantum polarization transfer. Judicious use of selective pulses and a z-filter period suppress artifacts with a two-step phase cycle, allowing higher digital resolution in a fixed measurement time. The novel correlation of C(ali)-C(ali)-CX (C(ali) for aliphatic carbons, CX for any carbon) reduces measurement time by an order of magnitude without sacrificing digital resolution. The experiment retains intensity from side-chain carbon resonances whose chemical shift dispersion is critical to minimize spectral degeneracy for large proteins with a predominance of secondary structure, such as beta-sheet rich fibrillar proteins and alpha-helical membrane proteins. We demonstrate the experiment for the beta1 immunoglobulin binding domain of protein G (GB1) and fibrils of the A30P mutant of alpha-synuclein, which is implicated in Parkinson's disease. Selective pulses of duration comparable the rotor period give optimal performance, but must be synchronized with the spinning in non-trivial ways to minimize chemical shift anisotropy recoupling effects. Soft pulses with a small bandwidth-duration product are best for exciting the approximately 70 ppm bandwidth required for aliphatic-only dimensions.
我们展示了用于固体蛋白质的改进的三维¹³C-¹³C-¹³C化学位移相关实验,该实验利用了带选择性相干转移、标量去耦和同核零量子极化转移。明智地使用选择性脉冲和z滤波周期,通过两步相位循环抑制伪影,从而在固定测量时间内实现更高的数字分辨率。新型的C(ali)-C(ali)-CX相关(C(ali)代表脂肪族碳,CX代表任何碳)将测量时间减少了一个数量级,同时不牺牲数字分辨率。该实验保留了来自侧链碳共振的强度,其化学位移分散对于最小化具有二级结构优势的大蛋白质(如富含β折叠的纤维状蛋白质和α螺旋膜蛋白)的光谱简并至关重要。我们展示了针对蛋白质G(GB1)的β1免疫球蛋白结合结构域和与帕金森病相关的α-突触核蛋白A30P突变体原纤维的实验。持续时间与转子周期相当的选择性脉冲具有最佳性能,但必须以非平凡的方式与旋转同步,以最小化化学位移各向异性再耦合效应。带宽-持续时间乘积小的软脉冲最适合激发仅脂肪族维度所需的约70 ppm带宽。